Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 AC092851.1-201ENST00000535964 478 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.72□□□□□ -1.81
CNTN1Q12860 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.72□□□□□ -1.81
CNTN1Q12860 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 MTCYBP28-201ENST00000566728 1132 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 MIR4504-201ENST00000577413 92 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.72□□□□□ -1.81
CNTN1Q12860 MIR3922-201ENST00000585192 84 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC020914.4-201ENST00000597690 277 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AP003973.1-201ENST00000604639 691 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN1Q12860 MIR486-1-201ENST00000612171 68 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AL138478.1-201ENST00000612252 832 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CNTN1Q12860 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 MTND5P28-201ENST00000438005 1594 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.81
CNTN1Q12860 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CNTN1Q12860 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CNTN1Q12860 MIR208A-201ENST00000362287 71 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 SNORA63.1-201ENST00000362493 131 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 SNORA70.4-201ENST00000365509 134 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTN1Q12860 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CNTN1Q12860 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CNTN1Q12860 CRYBB2P1-203ENST00000415709 538 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 OR4K6P-201ENST00000416478 897 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 Z75741.2-201ENST00000417272 1167 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 NANOGP5-201ENST00000424456 877 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 IFNNP1-201ENST00000429219 553 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.71□□□□□ -1.82
CNTN1Q12860 RPS26P56-201ENST00000444468 240 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC006480.1-201ENST00000449887 378 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC079776.3-201ENST00000450665 370 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC068305.1-201ENST00000497406 726 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.71□□□□□ -1.82
CNTN1Q12860 DUXAP2-201ENST00000519198 589 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.71□□□□□ -1.82
CNTN1Q12860 OR8K4P-201ENST00000534608 872 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 MIR3944-201ENST00000581277 108 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.71□□□□□ -1.82
CNTN1Q12860 VN1R83P-201ENST00000595685 445 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.71□□□□□ -1.82
CNTN1Q12860 HSPE1P14-201ENST00000605812 302 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AP003117.2-201ENST00000606010 545 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC019176.2-201ENST00000611579 315 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC012314.7-201ENST00000619693 93 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC023510.2-201ENST00000622162 746 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC068620.4-201ENST00000636730 1182 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 FAM157B-203ENST00000639350 358 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTN1Q12860 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTN1Q12860 DBF4P1-201ENST00000412976 1892 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 AC011978.2-201ENST00000569835 2054 ntBASIC3.71□□□□□ -1.82
CNTN1Q12860 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CNTN1Q12860 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CNTN1Q12860 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTN1Q12860 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CNTN1Q12860 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTN1Q12860 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTN1Q12860 AC007685.1-201ENST00000329806 452 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CNTN1Q12860 RNU1-89P-201ENST00000384592 164 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 HLFP1-201ENST00000402375 499 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CNTN1Q12860 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTN1Q12860 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 RPL7P53-201ENST00000421245 739 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTN1Q12860 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.7□□□□□ -1.82
CNTN1Q12860 NDUFA5P7-201ENST00000452914 242 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 HMGN3P1-201ENST00000453847 193 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CNTN1Q12860 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTN1Q12860 AC087879.1-201ENST00000474343 374 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 TRBV12-2-201ENST00000489763 344 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 AC005726.1-201ENST00000494679 427 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.7□□□□□ -1.82
CNTN1Q12860 SNX5P1-201ENST00000505757 1041 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 USP9YP5-201ENST00000511770 630 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 FTH1P9-201ENST00000513251 355 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 AC016065.2-201ENST00000514530 444 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 MIR2114-201ENST00000516645 80 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTN1Q12860 SUMO2P20-201ENST00000520803 283 ntBASIC3.7□□□□□ -1.82
CNTN1Q12860 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms