Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 Z83843.1-201ENST00000604070 3685 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 Y_RNA.126-201ENST00000363382 111 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL591034.1-201ENST00000407447 340 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 RNU4-65P-201ENST00000410473 140 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 RPL19P1-201ENST00000411635 428 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC245052.5-201ENST00000416320 649 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC091286.1-201ENST00000431233 461 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 KCTD10P1-201ENST00000434203 625 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 HMGB3P6-201ENST00000444896 598 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 CYCSP35-201ENST00000451978 304 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL024509.2-201ENST00000493462 493 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 HSPE1P20-201ENST00000538133 289 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 HIGD1AP1-201ENST00000550979 275 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC006130.2-201ENST00000586202 326 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC005229.3-201ENST00000603438 323 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC012442.3-202ENST00000636742 206 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AP002907.1-201ENST00000606361 1430 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AC009487.2-201ENST00000420969 6821 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL161912.2-201ENST00000565707 3007 ntBASIC2.42□□□□□ -2.02
HIST1H1AQ02539 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 MTND5P24-201ENST00000438892 1767 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 RNA5SP391-201ENST00000363456 119 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 PTMAP2-201ENST00000397627 327 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 RPF2P1-201ENST00000424137 906 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 SAR1AP4-201ENST00000429225 591 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC122718.1-201ENST00000439448 744 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 ATP5C1P1-201ENST00000441945 895 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 GSTA11P-201ENST00000452866 669 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC104472.2-201ENST00000469035 601 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC073522.1-201ENST00000483312 377 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 RNA5SP468-201ENST00000516782 93 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AL590282.1-201ENST00000610379 1136 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 VIS1.1-201ENST00000610517 203 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AL356490.1-201ENST00000623079 479 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 MIR6733-201ENST00000635723 61 ntBASIC2.41□□□□□ -2.02
HIST1H1AQ02539 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.41□□□□□ -2.02
HIST1H1AQ02539 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.4□□□□□ -2.02
HIST1H1AQ02539 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.02
HIST1H1AQ02539 RNU6-50P-201ENST00000362356 103 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 RNA5SP119-201ENST00000362715 117 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC234772.1-201ENST00000377927 937 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 SNORD88.1-201ENST00000408684 91 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 RNA5SP229-201ENST00000410809 99 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 TOMM22P1-201ENST00000418578 312 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 RPL21P110-201ENST00000433345 446 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 RPL23AP58-201ENST00000440453 469 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 ELOCP13-201ENST00000443934 329 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC069540.1-201ENST00000446320 988 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AL445669.2-201ENST00000454425 421 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms