Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RAE1P78406 AC000123.2-201ENST00000623124 461 ntBASIC4.26□□□□□ -1.73
RAE1P78406 FAM157B-203ENST00000639350 358 ntBASIC4.26□□□□□ -1.73
RAE1P78406 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RAE1P78406 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
RAE1P78406 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.25□□□□□ -1.73
RAE1P78406 AC139713.2-215ENST00000641428 5037 ntBASIC4.25□□□□□ -1.73
RAE1P78406 ASNSP1-201ENST00000518311 1939 ntBASIC4.25□□□□□ -1.73
RAE1P78406 PCAT14-202ENST00000627127 3935 ntBASIC4.25□□□□□ -1.73
RAE1P78406 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RAE1P78406 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
RAE1P78406 Y_RNA.6-201ENST00000362350 114 ntBASIC4.25□□□□□ -1.73
RAE1P78406 SNORD113.2-201ENST00000364166 89 ntBASIC4.25□□□□□ -1.73
RAE1P78406 RNA5SP22-201ENST00000365393 109 ntBASIC4.25□□□□□ -1.73
RAE1P78406 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RAE1P78406 RPS3AP23-201ENST00000401762 784 ntBASIC4.25□□□□□ -1.73
RAE1P78406 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.25□□□□□ -1.73
RAE1P78406 DDX18P3-201ENST00000404856 2007 ntBASIC4.25□□□□□ -1.73
RAE1P78406 RNU6-248P-201ENST00000410720 107 ntBASIC4.25□□□□□ -1.73
RAE1P78406 SNORA74C-2-201ENST00000411179 201 ntBASIC4.25□□□□□ -1.73
RAE1P78406 RPS15AP40-201ENST00000419621 391 ntBASIC4.25□□□□□ -1.73
RAE1P78406 Z97055.1-201ENST00000419730 712 ntBASIC4.25□□□□□ -1.73
RAE1P78406 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AL356583.2-201ENST00000426536 280 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 RPS20P1-201ENST00000434853 354 ntBASIC4.25□□□□□ -1.73
RAE1P78406 MTND1P4-201ENST00000435196 415 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.25□□□□□ -1.73
RAE1P78406 AL031667.1-201ENST00000440222 725 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC002381.1-201ENST00000447049 280 ntBASIC4.25□□□□□ -1.73
RAE1P78406 USP9YP12-201ENST00000450481 570 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 RPL35AP28-201ENST00000459730 331 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC104563.1-201ENST00000476147 376 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC138853.1-201ENST00000503549 823 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC093767.1-201ENST00000504523 156 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.25□□□□□ -1.73
RAE1P78406 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 RPL37P25-201ENST00000507308 276 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC021242.1-201ENST00000507315 2035 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.25□□□□□ -1.73
RAE1P78406 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.25□□□□□ -1.73
RAE1P78406 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AF213884.2-201ENST00000510417 903 ntBASIC4.25□□□□□ -1.73
RAE1P78406 RN7SKP298-201ENST00000515950 94 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.25□□□□□ -1.73
RAE1P78406 IGLV3-26-201ENST00000520756 302 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.25□□□□□ -1.73
RAE1P78406 MTND4LP18-201ENST00000526864 291 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.25□□□□□ -1.73
RAE1P78406 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.25□□□□□ -1.73
RAE1P78406 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.25□□□□□ -1.73
RAE1P78406 RPL23AP97-201ENST00000568955 471 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AP005119.2-201ENST00000579735 1105 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC090312.1-201ENST00000580637 348 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC233702.9-201ENST00000581528 203 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.25□□□□□ -1.73
RAE1P78406 BBIP1P1-201ENST00000602999 279 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AC131902.3-201ENST00000611767 581 ntBASIC4.25□□□□□ -1.73
RAE1P78406 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.25□□□□□ -1.73
RAE1P78406 AC007546.2-201ENST00000623996 360 ntBASIC4.25□□□□□ -1.73
RAE1P78406 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.25□□□□□ -1.73
RAE1P78406 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.25□□□□□ -1.73
RAE1P78406 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.25□□□□□ -1.73
RAE1P78406 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.25□□□□□ -1.73
RAE1P78406 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RAE1P78406 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 MAPK10-263ENST00000641052 4307 ntBASIC4.24□□□□□ -1.73
RAE1P78406 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 AC011155.1-201ENST00000316512 456 ntBASIC4.24□□□□□ -1.73
RAE1P78406 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RAE1P78406 Y_RNA.41-201ENST00000362646 102 ntBASIC4.24□□□□□ -1.73
RAE1P78406 RNU1-130P-201ENST00000363930 160 ntBASIC4.24□□□□□ -1.73
RAE1P78406 RNU6-343P-201ENST00000364709 104 ntBASIC4.24□□□□□ -1.73
RAE1P78406 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 Y_RNA.516-201ENST00000384541 124 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms