Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.79□□□□□ -1.8
PEX3P56589 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.79□□□□□ -1.8
PEX3P56589 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.79□□□□□ -1.8
PEX3P56589 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.79□□□□□ -1.8
PEX3P56589 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.79□□□□□ -1.8
PEX3P56589 AP001372.4-201ENST00000524889 472 ntBASIC3.79□□□□□ -1.8
PEX3P56589 ZNF971P-201ENST00000562068 1249 ntBASIC3.79□□□□□ -1.8
PEX3P56589 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.79□□□□□ -1.8
PEX3P56589 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.79□□□□□ -1.8
PEX3P56589 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.79□□□□□ -1.8
PEX3P56589 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PEX3P56589 AL355365.1-201ENST00000616480 294 ntBASIC3.79□□□□□ -1.8
PEX3P56589 AC009318.3-201ENST00000616916 503 ntBASIC3.79□□□□□ -1.8
PEX3P56589 AC244100.1-202ENST00000621554 382 ntBASIC3.79□□□□□ -1.8
PEX3P56589 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.79□□□□□ -1.8
PEX3P56589 AC009452.1-201ENST00000640823 606 ntBASIC3.79□□□□□ -1.8
PEX3P56589 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PEX3P56589 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PEX3P56589 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PEX3P56589 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 RNU1-87P-201ENST00000363727 170 ntBASIC3.78□□□□□ -1.8
PEX3P56589 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PEX3P56589 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 BX323014.1-201ENST00000412876 237 ntBASIC3.78□□□□□ -1.8
PEX3P56589 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.78□□□□□ -1.8
PEX3P56589 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.78□□□□□ -1.8
PEX3P56589 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.78□□□□□ -1.8
PEX3P56589 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PEX3P56589 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 snoU109.3-201ENST00000459477 145 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.78□□□□□ -1.8
PEX3P56589 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.78□□□□□ -1.8
PEX3P56589 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AC008885.2-201ENST00000509506 930 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AC093752.1-206ENST00000511823 336 ntBASIC3.78□□□□□ -1.8
PEX3P56589 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.78□□□□□ -1.8
PEX3P56589 SNORD116-26-201ENST00000516006 96 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.78□□□□□ -1.8
PEX3P56589 SMARCE1P4-201ENST00000523647 241 ntBASIC3.78□□□□□ -1.8
PEX3P56589 MIR4716-201ENST00000579628 84 ntBASIC3.78□□□□□ -1.8
PEX3P56589 MIR4666A-201ENST00000580160 79 ntBASIC3.78□□□□□ -1.8
PEX3P56589 PCNAP1-202ENST00000595299 752 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.78□□□□□ -1.8
PEX3P56589 AC024220.1-201ENST00000603675 484 ntBASIC3.78□□□□□ -1.8
PEX3P56589 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AL121652.1-201ENST00000608851 448 ntBASIC3.78□□□□□ -1.8
PEX3P56589 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
PEX3P56589 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.78□□□□□ -1.8
PEX3P56589 AC032011.1-201ENST00000611703 1549 ntBASIC3.78□□□□□ -1.8
PEX3P56589 PRO1804-201ENST00000623780 2050 ntBASIC3.78□□□□□ -1.8
PEX3P56589 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PEX3P56589 AC025263.3-201ENST00000622965 1396 ntBASIC3.77□□□□□ -1.81
PEX3P56589 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PEX3P56589 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PEX3P56589 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PEX3P56589 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
PEX3P56589 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PEX3P56589 RNA5SP197-201ENST00000363357 119 ntBASIC3.77□□□□□ -1.81
PEX3P56589 RNU6-619P-201ENST00000365146 108 ntBASIC3.77□□□□□ -1.81
PEX3P56589 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.77□□□□□ -1.81
PEX3P56589 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PEX3P56589 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.77□□□□□ -1.81
PEX3P56589 AC097713.2-201ENST00000430199 356 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AL158071.1-201ENST00000430315 461 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AL136097.1-201ENST00000456945 913 ntBASIC3.77□□□□□ -1.81
PEX3P56589 RPL21P10-201ENST00000463521 490 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AC008155.2-201ENST00000464337 397 ntBASIC3.77□□□□□ -1.81
PEX3P56589 RPL6P9-201ENST00000466502 859 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AC126121.1-201ENST00000482313 553 ntBASIC3.77□□□□□ -1.81
PEX3P56589 ACTG1P13-201ENST00000486987 1043 ntBASIC3.77□□□□□ -1.81
PEX3P56589 TRAV31-201ENST00000502780 342 ntBASIC3.77□□□□□ -1.81
PEX3P56589 UBE2V1P12-201ENST00000503954 474 ntBASIC3.77□□□□□ -1.81
PEX3P56589 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PEX3P56589 AC021146.1-201ENST00000511202 716 ntBASIC3.77□□□□□ -1.81
PEX3P56589 SNORA19.3-201ENST00000516165 130 ntBASIC3.77□□□□□ -1.81
PEX3P56589 RNU6-415P-201ENST00000516252 97 ntBASIC3.77□□□□□ -1.81
PEX3P56589 SNORA70.19-201ENST00000516717 90 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AC091163.3-201ENST00000518269 1144 ntBASIC3.77□□□□□ -1.81
PEX3P56589 IGKV2-23-201ENST00000518729 323 ntBASIC3.77□□□□□ -1.81
PEX3P56589 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.77□□□□□ -1.81
PEX3P56589 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.77□□□□□ -1.81
PEX3P56589 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.77□□□□□ -1.81
PEX3P56589 OR4U1P-201ENST00000554958 912 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AC084757.1-201ENST00000559987 490 ntBASIC3.77□□□□□ -1.81
PEX3P56589 MIR3186-201ENST00000577404 85 ntBASIC3.77□□□□□ -1.81
PEX3P56589 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PEX3P56589 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PEX3P56589 AC023510.2-201ENST00000622162 746 ntBASIC3.77□□□□□ -1.81
PEX3P56589 AC127502.3-201ENST00000636170 1206 ntBASIC3.77□□□□□ -1.81
PEX3P56589 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PEX3P56589 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.77□□□□□ -1.81
PEX3P56589 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.77□□□□□ -1.81
PEX3P56589 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
PEX3P56589 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PEX3P56589 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PEX3P56589 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
PEX3P56589 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms