Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXG1P55316 AP001642.1-201ENST00000624727 2117 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 Y_RNA.263-201ENST00000364659 114 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 Y_RNA.295-201ENST00000364918 102 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 Y_RNA.356-201ENST00000365475 113 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXG1P55316 RPL31P1-201ENST00000398116 372 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 RNU6-77P-201ENST00000410554 91 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC068533.2-201ENST00000411872 306 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC092745.2-202ENST00000411880 369 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL807761.1-201ENST00000417622 171 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 USP9YP13-201ENST00000417797 480 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 RPL21P111-201ENST00000418453 477 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 UQCRBP1-201ENST00000421129 336 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.03□□□□□ -1.76
FOXG1P55316 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 RPL7AP25-201ENST00000423357 805 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 KCTD9P3-201ENST00000434597 1169 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 MTND1P18-201ENST00000448191 573 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 AL033528.1-201ENST00000453780 140 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 ISCUP1-201ENST00000454451 448 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 RPL7P48-201ENST00000461513 746 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AK3P4-201ENST00000504283 583 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC098799.3-201ENST00000506095 438 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 NDUFB4P2-201ENST00000509515 391 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC009646.1-201ENST00000510455 318 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXG1P55316 RPL7L1P13-201ENST00000511702 739 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AF131216.2-201ENST00000512316 564 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 LRRC34P2-201ENST00000514850 553 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 IGJP1-201ENST00000522682 475 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 OR5M7P-201ENST00000526140 972 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 OR4A45P-201ENST00000529954 901 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL133457.1-201ENST00000564251 987 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 RPL12P25-202ENST00000598100 674 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL390838.2-201ENST00000602394 274 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC091488.1-201ENST00000604239 660 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL161729.4-201ENST00000604650 476 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AC055876.5-201ENST00000605667 259 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL359535.1-201ENST00000612100 1087 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 AL020991.1-201ENST00000612314 373 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 OR2L1P-202ENST00000641567 1023 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXG1P55316 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXG1P55316 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXG1P55316 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 AL022578.1-201ENST00000439330 1433 ntBASIC4.03□□□□□ -1.76
FOXG1P55316 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXG1P55316 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXG1P55316 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXG1P55316 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
FOXG1P55316 RNU4-73P-201ENST00000363164 141 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 Y_RNA.162-201ENST00000363683 102 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 RNU1-32P-201ENST00000363937 159 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 Y_RNA.296-201ENST00000364930 108 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 RNU5E-5P-201ENST00000365379 116 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
FOXG1P55316 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXG1P55316 AL161909.1-201ENST00000397390 712 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXG1P55316 RN7SKP285-201ENST00000410137 318 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 AL358176.3-201ENST00000420757 454 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 RPL36AP10-201ENST00000421785 322 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 AL389915.1-201ENST00000422463 466 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 AC245028.1-201ENST00000423259 256 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 AP001324.1-201ENST00000428553 399 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 AL512649.1-201ENST00000428997 581 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXG1P55316 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXG1P55316 AL451074.3-201ENST00000437709 472 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.02□□□□□ -1.77
FOXG1P55316 AC093019.1-201ENST00000443135 252 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms