Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP11P51784 OR52E6-202ENST00000379946 954 ntBASIC5.86□□□□□ -1.47
USP11P51784 RNU6-1105P-201ENST00000384774 107 ntBASIC5.86□□□□□ -1.47
USP11P51784 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
USP11P51784 RN7SKP222-201ENST00000410651 315 ntBASIC5.86□□□□□ -1.47
USP11P51784 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.86□□□□□ -1.47
USP11P51784 MTCO3P21-201ENST00000430791 643 ntBASIC5.86□□□□□ -1.47
USP11P51784 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.86□□□□□ -1.47
USP11P51784 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.86□□□□□ -1.47
USP11P51784 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.86□□□□□ -1.47
USP11P51784 RNU7-27P-201ENST00000459281 62 ntBASIC5.86□□□□□ -1.47
USP11P51784 RN7SL515P-201ENST00000463999 297 ntBASIC5.86□□□□□ -1.47
USP11P51784 AL163540.1-201ENST00000485382 386 ntBASIC5.86□□□□□ -1.47
USP11P51784 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP11P51784 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.86□□□□□ -1.47
USP11P51784 RNU6-1170P-201ENST00000515974 106 ntBASIC5.86□□□□□ -1.47
USP11P51784 RNU4-49P-201ENST00000516080 140 ntBASIC5.86□□□□□ -1.47
USP11P51784 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.86□□□□□ -1.47
USP11P51784 AC068993.1-201ENST00000546724 589 ntBASIC5.86□□□□□ -1.47
USP11P51784 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.86□□□□□ -1.47
USP11P51784 AC090751.1-201ENST00000566966 267 ntBASIC5.86□□□□□ -1.47
USP11P51784 AC009852.2-201ENST00000567898 485 ntBASIC5.86□□□□□ -1.47
USP11P51784 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.86□□□□□ -1.47
USP11P51784 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.86□□□□□ -1.47
USP11P51784 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.86□□□□□ -1.47
USP11P51784 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.86□□□□□ -1.47
USP11P51784 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.86□□□□□ -1.47
USP11P51784 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
USP11P51784 AC114947.2-201ENST00000565748 2125 ntBASIC5.86□□□□□ -1.47
USP11P51784 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.86□□□□□ -1.47
USP11P51784 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 THAP12P4-201ENST00000528321 2266 ntBASIC5.85□□□□□ -1.47
USP11P51784 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 MIR137-201ENST00000385223 102 ntBASIC5.85□□□□□ -1.47
USP11P51784 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USP11P51784 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 RNU6-272P-201ENST00000411028 104 ntBASIC5.85□□□□□ -1.47
USP11P51784 DPPA2P3-201ENST00000411853 655 ntBASIC5.85□□□□□ -1.47
USP11P51784 NDUFB4P5-201ENST00000415445 361 ntBASIC5.85□□□□□ -1.47
USP11P51784 AC245054.2-201ENST00000415639 319 ntBASIC5.85□□□□□ -1.47
USP11P51784 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.85□□□□□ -1.47
USP11P51784 DDX39BP1-205ENST00000422507 192 ntBASIC5.85□□□□□ -1.47
USP11P51784 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 SRIP2-201ENST00000428470 166 ntBASIC5.85□□□□□ -1.47
USP11P51784 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 BNIP3P2-201ENST00000441221 577 ntBASIC5.85□□□□□ -1.47
USP11P51784 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 RNU6-329P-201ENST00000459618 107 ntBASIC5.85□□□□□ -1.47
USP11P51784 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 AC027575.1-201ENST00000481064 460 ntBASIC5.85□□□□□ -1.47
USP11P51784 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 BTF3P13-201ENST00000513224 490 ntBASIC5.85□□□□□ -1.47
USP11P51784 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.85□□□□□ -1.47
USP11P51784 AC022616.6-201ENST00000520479 119 ntBASIC5.85□□□□□ -1.47
USP11P51784 PDCD5P1-201ENST00000543528 309 ntBASIC5.85□□□□□ -1.47
USP11P51784 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 AC005668.1-201ENST00000571142 476 ntBASIC5.85□□□□□ -1.47
USP11P51784 AP005432.2-201ENST00000608162 586 ntBASIC5.85□□□□□ -1.47
USP11P51784 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.85□□□□□ -1.47
USP11P51784 AC090425.1-201ENST00000610007 140 ntBASIC5.85□□□□□ -1.47
USP11P51784 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP11P51784 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
USP11P51784 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.85□□□□□ -1.47
USP11P51784 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.85□□□□□ -1.47
USP11P51784 AC119744.1-201ENST00000454746 1715 ntBASIC5.85□□□□□ -1.47
USP11P51784 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
USP11P51784 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.84□□□□□ -1.47
USP11P51784 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.84□□□□□ -1.47
USP11P51784 AL138820.1-201ENST00000617901 5305 ntBASIC5.84□□□□□ -1.47
USP11P51784 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
USP11P51784 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.84□□□□□ -1.47
USP11P51784 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 AC011155.1-201ENST00000316512 456 ntBASIC5.84□□□□□ -1.47
USP11P51784 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP11P51784 SNORA74A-201ENST00000364089 198 ntBASIC5.84□□□□□ -1.47
USP11P51784 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms