Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL163152.1-201ENST00000642001 374 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL12P48061 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL12P48061 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL12P48061 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL12P48061 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CXCL12P48061 MIR423-201ENST00000362201 94 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 RNU1-87P-201ENST00000363727 170 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL12P48061 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL12P48061 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CXCL12P48061 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CXCL12P48061 AL445529.1-201ENST00000398713 389 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC013404.1-201ENST00000413068 249 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL12P48061 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
CXCL12P48061 ARL2BPP3-201ENST00000421226 480 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 NPM1P24-201ENST00000428039 894 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC000041.1-201ENST00000439655 175 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AL353093.1-201ENST00000441292 436 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.15□□□□□ -1.91
CXCL12P48061 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.15□□□□□ -1.91
CXCL12P48061 RPL34P26-201ENST00000445636 354 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 MTND2P6-201ENST00000455337 1030 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 CEACAMP4-201ENST00000457676 421 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 CABYRP1-201ENST00000465493 1045 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC093663.2-201ENST00000484625 313 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 TRAV31-201ENST00000502780 342 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL12P48061 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.15□□□□□ -1.91
CXCL12P48061 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL12P48061 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.15□□□□□ -1.91
CXCL12P48061 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL12P48061 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.15□□□□□ -1.91
CXCL12P48061 AC103881.1-201ENST00000603476 538 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 OR4H6P-202ENST00000603819 340 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AL450270.1-201ENST00000606160 391 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC004775.1-201ENST00000607389 753 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC110792.4-201ENST00000609843 298 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AL359535.1-201ENST00000612100 1087 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 MIR486-1-201ENST00000612171 68 ntBASIC3.15□□□□□ -1.91
CXCL12P48061 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL12P48061 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL12P48061 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL12P48061 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL12P48061 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL12P48061 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL12P48061 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL12P48061 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
CXCL12P48061 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CXCL12P48061 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL12P48061 AC092832.1-201ENST00000422934 400 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AC073508.1-201ENST00000428866 656 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL12P48061 AC069540.1-201ENST00000446320 988 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AC016696.1-201ENST00000446949 318 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.14□□□□□ -1.91
CXCL12P48061 RN7SL93P-201ENST00000463035 293 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 RPL9P32-201ENST00000464118 620 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL12P48061 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL12P48061 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL12P48061 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL12P48061 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL12P48061 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL12P48061 MIR4512-201ENST00000583257 77 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL12P48061 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL12P48061 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL12P48061 AL021368.1-201ENST00000607490 540 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 AC100793.4-201ENST00000613683 429 ntBASIC3.14□□□□□ -1.91
CXCL12P48061 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL12P48061 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL12P48061 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL12P48061 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AL136360.1-201ENST00000503377 1900 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL12P48061 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL12P48061 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL12P48061 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CXCL12P48061 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL12P48061 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.13□□□□□ -1.91
CXCL12P48061 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL12P48061 UBE2V1P15-201ENST00000407776 448 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.13□□□□□ -1.91
CXCL12P48061 MTCO3P4-201ENST00000419236 787 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AL513174.1-201ENST00000423182 629 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CXCL12P48061 CBX1P4-201ENST00000439415 457 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms