Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MTCO2P20-201ENST00000437339 673 ntBASIC3.63□□□□□ -1.83
SOX3P41225 CDC27P1-201ENST00000445384 715 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 snoU13.7-201ENST00000459220 104 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RN7SL93P-201ENST00000463035 293 ntBASIC3.63□□□□□ -1.83
SOX3P41225 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 HMGB1P21-201ENST00000502313 581 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 OR5H4P-201ENST00000510851 923 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC116353.3-201ENST00000511215 249 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC018797.3-201ENST00000513388 1241 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RN7SKP82-201ENST00000516786 223 ntBASIC3.63□□□□□ -1.83
SOX3P41225 SNORA48.10-201ENST00000516965 160 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 AP001189.2-201ENST00000527320 189 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AP000790.1-201ENST00000528891 737 ntBASIC3.63□□□□□ -1.83
SOX3P41225 DUXAP5-201ENST00000529668 529 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 AP000619.3-201ENST00000535634 1127 ntBASIC3.63□□□□□ -1.83
SOX3P41225 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 TRAV15-201ENST00000556680 249 ntBASIC3.63□□□□□ -1.83
SOX3P41225 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 MIR5685-201ENST00000579080 79 ntBASIC3.63□□□□□ -1.83
SOX3P41225 VN1R78P-201ENST00000597393 564 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 AC080013.3-201ENST00000606839 578 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 AL451074.6-201ENST00000608512 729 ntBASIC3.63□□□□□ -1.83
SOX3P41225 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 AL139089.1-201ENST00000620372 975 ntBASIC3.63□□□□□ -1.83
SOX3P41225 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AP006248.2-201ENST00000623309 592 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC098679.5-201ENST00000624394 571 ntBASIC3.63□□□□□ -1.83
SOX3P41225 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 OR11H5P-202ENST00000641612 1325 ntBASIC3.63□□□□□ -1.83
SOX3P41225 MTND5P28-201ENST00000438005 1594 ntBASIC3.63□□□□□ -1.83
SOX3P41225 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 LINC00561-201ENST00000565815 2738 ntBASIC3.63□□□□□ -1.83
SOX3P41225 UBE3AP2-201ENST00000429033 2259 ntBASIC3.63□□□□□ -1.83
SOX3P41225 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SOX3P41225 AL049555.1-201ENST00000562834 1933 ntBASIC3.62□□□□□ -1.83
SOX3P41225 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SOX3P41225 RNU6-1214P-201ENST00000363650 109 ntBASIC3.62□□□□□ -1.83
SOX3P41225 RNA5SP97-201ENST00000365006 84 ntBASIC3.62□□□□□ -1.83
SOX3P41225 RNU6-441P-201ENST00000384545 106 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AF228730.1-201ENST00000397972 663 ntBASIC3.62□□□□□ -1.83
SOX3P41225 CYCSP19-201ENST00000411715 316 ntBASIC3.62□□□□□ -1.83
SOX3P41225 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 RPL31P54-201ENST00000429803 370 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX3P41225 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX3P41225 RANP8-201ENST00000444720 713 ntBASIC3.62□□□□□ -1.83
SOX3P41225 EXTL2P1-201ENST00000446218 416 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX3P41225 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
SOX3P41225 RPL21P134-201ENST00000453468 483 ntBASIC3.62□□□□□ -1.83
SOX3P41225 MTND2P14-201ENST00000482139 351 ntBASIC3.62□□□□□ -1.83
SOX3P41225 ACTG1P13-201ENST00000486987 1043 ntBASIC3.62□□□□□ -1.83
SOX3P41225 KLRA1P-201ENST00000503499 986 ntBASIC3.62□□□□□ -1.83
SOX3P41225 WBP1LP4-201ENST00000505043 344 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AC079395.1-201ENST00000510981 262 ntBASIC3.62□□□□□ -1.83
SOX3P41225 RNU6-1261P-201ENST00000517194 104 ntBASIC3.62□□□□□ -1.83
SOX3P41225 NDUFA5P2-201ENST00000519723 344 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AC027309.2-201ENST00000520566 192 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX3P41225 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX3P41225 MTND2P26-201ENST00000528255 1029 ntBASIC3.62□□□□□ -1.83
SOX3P41225 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 AC010198.2-201ENST00000550612 259 ntBASIC3.62□□□□□ -1.83
SOX3P41225 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX3P41225 AC090888.2-201ENST00000559765 1144 ntBASIC3.62□□□□□ -1.83
SOX3P41225 HSPE1P5-201ENST00000561489 272 ntBASIC3.62□□□□□ -1.83
SOX3P41225 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX3P41225 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX3P41225 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX3P41225 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.62□□□□□ -1.83
SOX3P41225 CLIC4P2-201ENST00000601934 717 ntBASIC3.62□□□□□ -1.83
SOX3P41225 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX3P41225 ELOCP35-201ENST00000604289 336 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms