Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC016716.1-201ENST00000265882 708 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 OR6K3-202ENST00000368146 996 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 MIR183-201ENST00000384958 110 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 SNORD17-201ENST00000390930 237 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 RSL24D1P1-201ENST00000404972 493 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 RNU6-77P-201ENST00000410554 91 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 AC007390.1-201ENST00000415722 356 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 GLRXP1-201ENST00000423261 334 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 FO393414.1-201ENST00000428697 1184 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.35□□□□□ -1.87
SHMT2P34897 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 AC004865.1-201ENST00000442276 1003 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 PPIAP3-201ENST00000450588 505 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.35□□□□□ -1.87
SHMT2P34897 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 AC087312.1-201ENST00000471411 480 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.35□□□□□ -1.87
SHMT2P34897 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 FCF1P8-201ENST00000510322 597 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AP004242.1-201ENST00000533701 349 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.35□□□□□ -1.87
SHMT2P34897 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.35□□□□□ -1.87
SHMT2P34897 CR383656.14-201ENST00000551951 406 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AC011611.5-201ENST00000552477 578 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 MIR5186-201ENST00000577504 120 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AC053481.3-201ENST00000577881 843 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 RN7SL339P-201ENST00000580597 296 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 AC105429.2-201ENST00000610567 517 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 XIST_intron.1-201ENST00000619444 68 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AC012314.7-201ENST00000619693 93 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
SHMT2P34897 AC106730.3-201ENST00000624568 641 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AL109659.3-201ENST00000624985 950 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 SEPT7P7-201ENST00000420492 1301 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.35□□□□□ -1.87
SHMT2P34897 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 GABPAP-201ENST00000419271 1356 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 AF127577.6-201ENST00000623352 2191 ntBASIC3.35□□□□□ -1.87
SHMT2P34897 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.35□□□□□ -1.87
SHMT2P34897 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHMT2P34897 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHMT2P34897 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.34□□□□□ -1.87
SHMT2P34897 AC073055.1-201ENST00000456901 1621 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AL645937.1-201ENST00000641739 1652 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHMT2P34897 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHMT2P34897 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.34□□□□□ -1.87
SHMT2P34897 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHMT2P34897 RNU6-932P-201ENST00000391108 106 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHMT2P34897 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.34□□□□□ -1.87
SHMT2P34897 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.34□□□□□ -1.87
SHMT2P34897 AL049610.1-201ENST00000423374 372 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 ELOCP6-201ENST00000429066 328 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AL159987.2-201ENST00000432754 307 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.34□□□□□ -1.87
SHMT2P34897 RPL21P110-201ENST00000433345 446 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 SETP5-201ENST00000437270 562 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AP000949.1-201ENST00000438328 629 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 RAB11AP1-201ENST00000442978 646 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 AC005002.1-201ENST00000447458 540 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 ELOCP12-201ENST00000458706 328 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 RPL21P18-201ENST00000469899 480 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.34□□□□□ -1.87
SHMT2P34897 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 AC021146.5-201ENST00000503544 545 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.34□□□□□ -1.87
SHMT2P34897 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.34□□□□□ -1.87
SHMT2P34897 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHMT2P34897 AC074029.1-201ENST00000552531 1044 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 SERPINE4P-201ENST00000554978 281 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.34□□□□□ -1.87
SHMT2P34897 AC133794.1-201ENST00000602731 914 ntBASIC3.34□□□□□ -1.87
SHMT2P34897 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms