Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 TAF9P2-201ENST00000454958 515 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AC092754.2-201ENST00000463506 460 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AC010469.1-201ENST00000463864 576 ntBASIC4.54□□□□□ -1.68
CIITAP33076 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.54□□□□□ -1.68
CIITAP33076 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.54□□□□□ -1.68
CIITAP33076 AC109471.1-201ENST00000511631 612 ntBASIC4.54□□□□□ -1.68
CIITAP33076 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.54□□□□□ -1.68
CIITAP33076 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.54□□□□□ -1.68
CIITAP33076 AC067852.4-201ENST00000590314 478 ntBASIC4.54□□□□□ -1.68
CIITAP33076 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CIITAP33076 VN1R82P-201ENST00000601481 356 ntBASIC4.54□□□□□ -1.68
CIITAP33076 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AL451044.1-201ENST00000604867 238 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.54□□□□□ -1.68
CIITAP33076 AC004223.4-201ENST00000612426 332 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AL158196.1-201ENST00000616786 434 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.54□□□□□ -1.68
CIITAP33076 AC000123.2-201ENST00000623124 461 ntBASIC4.54□□□□□ -1.68
CIITAP33076 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.54□□□□□ -1.68
CIITAP33076 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 AL356489.2-201ENST00000566968 3528 ntBASIC4.54□□□□□ -1.68
CIITAP33076 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.53□□□□□ -1.68
CIITAP33076 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.53□□□□□ -1.68
CIITAP33076 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 ZNF33CP-201ENST00000432492 2030 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC068254.2-201ENST00000623938 3577 ntBASIC4.53□□□□□ -1.68
CIITAP33076 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CIITAP33076 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.53□□□□□ -1.68
CIITAP33076 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.53□□□□□ -1.68
CIITAP33076 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CIITAP33076 RNA5SP52-201ENST00000362448 134 ntBASIC4.53□□□□□ -1.68
CIITAP33076 RNA5SP399-201ENST00000364003 117 ntBASIC4.53□□□□□ -1.68
CIITAP33076 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
CIITAP33076 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 SNORA57.1-201ENST00000391227 145 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 TIMM9P2-201ENST00000419324 266 ntBASIC4.53□□□□□ -1.68
CIITAP33076 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AL691449.1-201ENST00000426570 421 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 AC008065.1-201ENST00000428525 348 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC010153.1-201ENST00000432862 727 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC083863.1-201ENST00000438811 231 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC069285.2-201ENST00000440210 275 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 RPL12P26-201ENST00000452430 487 ntBASIC4.53□□□□□ -1.68
CIITAP33076 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 RPL23AP2-201ENST00000471227 466 ntBASIC4.53□□□□□ -1.68
CIITAP33076 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CIITAP33076 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 AC011352.3-201ENST00000505162 593 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC048346.1-201ENST00000510247 144 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC110792.2-201ENST00000510278 224 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC109445.1-201ENST00000512356 383 ntBASIC4.53□□□□□ -1.68
CIITAP33076 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 NDUFA5P2-201ENST00000519723 344 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 AP003033.1-201ENST00000527244 415 ntBASIC4.53□□□□□ -1.68
CIITAP33076 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.53□□□□□ -1.68
CIITAP33076 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CIITAP33076 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.53□□□□□ -1.68
CIITAP33076 VN1R85P-201ENST00000601587 426 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC025165.5-201ENST00000602802 578 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC091488.1-201ENST00000604239 660 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC018714.1-201ENST00000605028 208 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC090425.2-201ENST00000608818 501 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC024941.1-201ENST00000612250 334 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.53□□□□□ -1.68
CIITAP33076 Z69908.1-201ENST00000622603 247 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC091931.1-201ENST00000623488 728 ntBASIC4.53□□□□□ -1.68
CIITAP33076 AC073530.2-201ENST00000623987 261 ntBASIC4.53□□□□□ -1.68
CIITAP33076 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CIITAP33076 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.53□□□□□ -1.68
CIITAP33076 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
CIITAP33076 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CIITAP33076 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CIITAP33076 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CIITAP33076 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CIITAP33076 AC097504.1-201ENST00000515103 2415 ntBASIC4.52□□□□□ -1.69
CIITAP33076 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CIITAP33076 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.52□□□□□ -1.69
CIITAP33076 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CIITAP33076 RNU6-213P-201ENST00000384051 104 ntBASIC4.52□□□□□ -1.69
CIITAP33076 LAP3P1-201ENST00000403648 294 ntBASIC4.52□□□□□ -1.69
CIITAP33076 PRRC2CP1-201ENST00000404428 159 ntBASIC4.52□□□□□ -1.69
CIITAP33076 SNORA3C-201ENST00000408792 125 ntBASIC4.52□□□□□ -1.69
CIITAP33076 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CIITAP33076 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.52□□□□□ -1.69
CIITAP33076 NPM1P34-201ENST00000428821 893 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms