Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC007991.1-201ENST00000522680 631 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AP000926.4-201ENST00000527351 454 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA3P32297 OR4C2P-201ENST00000530855 1064 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC068339.2-201ENST00000534395 618 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC008011.1-201ENST00000545989 227 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC092470.1-201ENST00000546187 132 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC009101.1-201ENST00000568135 242 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC074051.3-201ENST00000570238 358 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 MIR4444-1-201ENST00000581696 74 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 MIR4444-2-201ENST00000584390 74 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC009948.4-201ENST00000604692 675 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL365503.1-201ENST00000605247 905 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA3P32297 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA3P32297 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CHRNA3P32297 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHRNA3P32297 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA3P32297 AC058791.1-201ENST00000608412 3198 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 GABPAP-201ENST00000419271 1356 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA3P32297 SNORA73.2-201ENST00000364946 201 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 SNORA5A-201ENST00000384111 134 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 SNORD3H-201ENST00000384486 214 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 MIR620-201ENST00000385232 95 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AC007066.1-201ENST00000392902 381 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 SOD2P1-201ENST00000396543 562 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AL355143.1-201ENST00000407101 841 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA3P32297 LIPT1P1-201ENST00000415870 1186 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 OFD1P18Y-201ENST00000420889 959 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 MRPS18BP2-201ENST00000434310 759 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 B3GNT2P1-201ENST00000434960 952 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA3P32297 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA3P32297 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA3P32297 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA3P32297 AL034418.1-201ENST00000448675 860 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 OR51B8P-201ENST00000449892 769 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 Z99714.1-201ENST00000450463 807 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 NAP1L1P3-201ENST00000462291 880 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 NDUFB4P9-201ENST00000511646 388 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA3P32297 AC119751.1-201ENST00000513357 765 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 RNU6-334P-201ENST00000517072 102 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 OR4A45P-201ENST00000529954 901 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.8□□□□□ -1.8
CHRNA3P32297 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.8□□□□□ -1.8
CHRNA3P32297 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CHRNA3P32297 TGIF1P1-201ENST00000558095 802 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AC107954.1-201ENST00000565906 727 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AC104072.1-201ENST00000568817 668 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA3P32297 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA3P32297 AC012531.5-201ENST00000611375 151 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 AL732618.1-201ENST00000623251 301 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHRNA3P32297 AP000553.6-201ENST00000641242 118 ntBASIC3.8□□□□□ -1.8
CHRNA3P32297 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA3P32297 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA3P32297 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA3P32297 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA3P32297 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA3P32297 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHRNA3P32297 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA3P32297 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA3P32297 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CHRNA3P32297 RNU6-354P-201ENST00000383862 107 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 RNU6-610P-201ENST00000384264 107 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 TMSB4XP8-201ENST00000402089 135 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 HSPE1P26-201ENST00000405341 275 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 MTCO3P31-201ENST00000405526 789 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 TMSB4XP6-201ENST00000415187 135 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 MTND2P16-201ENST00000419987 799 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 PTP4A1P5-201ENST00000420305 455 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 AC093698.1-201ENST00000423843 571 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 TMSB4XP1-201ENST00000424567 135 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA3P32297 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 MRPS31P2-201ENST00000451581 518 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNA3P32297 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA3P32297 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA3P32297 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA3P32297 RNU6-579P-201ENST00000516879 102 ntBASIC3.79□□□□□ -1.8
CHRNA3P32297 RN7SKP116-201ENST00000516902 319 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms