Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN6P29350 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN6P29350 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN6P29350 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN6P29350 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN6P29350 MTND4P10-201ENST00000446199 1363 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PTPN6P29350 MIR423-201ENST00000362201 94 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNU6-374P-201ENST00000364146 108 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNU6-115P-201ENST00000364310 107 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNA5SP97-201ENST00000365006 84 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 U1.1-201ENST00000384101 164 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 MIR554-201ENST00000384874 96 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 ZNF602P-201ENST00000405929 924 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNU6-575P-201ENST00000411326 105 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RPL30P2-201ENST00000414021 291 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 AL365396.1-201ENST00000430854 671 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 SETP5-201ENST00000437270 562 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 MTCO2P32-201ENST00000514865 403 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC112206.4-201ENST00000515142 405 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNA5SP164-201ENST00000516533 110 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 SCARNA14-201ENST00000516903 136 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNA5SP135-201ENST00000517019 125 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 RNU6-1073P-201ENST00000517182 106 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 IGKV2D-36-201ENST00000518643 226 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 OR4A45P-201ENST00000529954 901 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.56□□□□□ -1.84
PTPN6P29350 LSM6P2-201ENST00000552208 177 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 HSPE1P5-201ENST00000561489 272 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 MIR5685-201ENST00000579080 79 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.56□□□□□ -1.84
PTPN6P29350 AL451086.1-201ENST00000605596 223 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 MIR92B-201ENST00000607575 96 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AL513477.2-201ENST00000607858 568 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AL590282.1-201ENST00000610379 1136 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 FP236240.3-201ENST00000623061 327 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AL356863.1-201ENST00000623378 1080 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 AC126544.2-201ENST00000625174 749 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 OR6C71P-202ENST00000641886 1107 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PTPN6P29350 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PTPN6P29350 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PTPN6P29350 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN6P29350 AC073073.2-201ENST00000609827 2578 ntBASIC3.56□□□□□ -1.84
PTPN6P29350 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN6P29350 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTPN6P29350 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PTPN6P29350 AC117529.2-201ENST00000512159 2068 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 AL139098.1-201ENST00000407291 389 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 Z98941.1-201ENST00000407764 100 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 RHEBP3-201ENST00000411920 351 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 BTF3P8-201ENST00000414577 526 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN6P29350 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN6P29350 PTP4A1P7-201ENST00000423476 514 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN6P29350 AC011242.1-201ENST00000433596 1158 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN6P29350 AL662791.1-201ENST00000441992 928 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC244505.3-201ENST00000454598 187 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN6P29350 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC091153.1-201ENST00000466297 402 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 GAPDHP39-201ENST00000481866 979 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 RPL23AP55-201ENST00000498163 452 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC008427.1-201ENST00000503102 655 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC023632.1-201ENST00000518463 375 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC044913.1-201ENST00000557200 430 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN6P29350 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN6P29350 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN6P29350 AC244505.7-201ENST00000599675 272 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 BNIP3P31-201ENST00000604515 566 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms