Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MIR4504-201ENST00000577413 92 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 MIR4284-201ENST00000578924 81 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.87□□□□□ -1.95
HLA-DMAP28067 AC078899.3-201ENST00000599065 212 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 AC104785.1-201ENST00000603220 588 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 AL391497.1-201ENST00000608671 547 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 AL445423.1-201ENST00000609941 536 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DMAP28067 AL162233.1-201ENST00000620014 944 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DMAP28067 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DMAP28067 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DMAP28067 AC119674.1-207ENST00000641355 633 ntBASIC2.87□□□□□ -1.95
HLA-DMAP28067 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DMAP28067 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.87□□□□□ -1.95
HLA-DMAP28067 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HLA-DMAP28067 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DMAP28067 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DMAP28067 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 SNORA51.12-201ENST00000384448 134 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 SNORA26.7-201ENST00000391288 122 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 RPL32P23-201ENST00000397237 405 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 RSL24D1P1-201ENST00000404972 493 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 CST9LP2-201ENST00000437612 320 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 MTND5P8-201ENST00000449817 1083 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 MTND2P6-201ENST00000455337 1030 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 snoU13.4-201ENST00000458916 104 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 VN1R105P-201ENST00000486595 910 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC105914.1-201ENST00000511798 226 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 APOOP4-201ENST00000513530 597 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 SNORA31.13-201ENST00000516624 135 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC239860.2-201ENST00000525886 270 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AP003385.6-201ENST00000531603 374 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 AL157394.1-201ENST00000562983 1224 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 CBX3P2-202ENST00000583365 535 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC005229.3-201ENST00000603438 323 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 MIR6716-201ENST00000613413 80 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 AC006111.3-201ENST00000622137 383 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 AL136520.1-201ENST00000600311 1322 ntBASIC2.86□□□□□ -1.95
HLA-DMAP28067 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DMAP28067 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DMAP28067 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 RNU1-32P-201ENST00000363937 159 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 RNU6-1005P-201ENST00000384519 107 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 MIR142-201ENST00000384835 87 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AL356057.1-202ENST00000402263 756 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC073264.1-201ENST00000411508 416 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 YPEL5P1-201ENST00000419731 367 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 OFD1P18Y-201ENST00000420889 959 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 MORF4L1P7-201ENST00000426038 703 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 ZNF965P-201ENST00000432501 817 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 SETP8-201ENST00000435341 628 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 RPL21P2-201ENST00000440049 481 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 RRM2P4-201ENST00000441721 562 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 RPL21P89-201ENST00000444021 467 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC097499.1-201ENST00000444277 208 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 RPS15AP29-201ENST00000445539 400 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC114755.5-201ENST00000447760 831 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 RPS23P3-201ENST00000470993 430 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 CDH12P4-201ENST00000517835 295 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms