Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC3P19447 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC067959.1-201ENST00000604334 379 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 MEMO1P5-201ENST00000604810 406 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 AP001596.2-201ENST00000608410 312 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 AL008636.1-201ENST00000625038 1018 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ERCC3P19447 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC3P19447 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC3P19447 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC3P19447 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 AC006206.1-201ENST00000544842 3387 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 Y_RNA.573-201ENST00000384763 105 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ERCC3P19447 RNU6-278P-201ENST00000390945 109 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AL078599.1-201ENST00000402075 293 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC3P19447 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.03□□□□□ -1.44
ERCC3P19447 RPL26P29-201ENST00000415623 438 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC3P19447 AC092832.1-201ENST00000422934 400 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 NDUFB4P8-201ENST00000435351 367 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 FTH1P1-201ENST00000437933 532 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC3P19447 RPL23AP33-201ENST00000442301 452 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC3P19447 SLC25A18P1-201ENST00000449385 454 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 CBX1P2-201ENST00000453841 458 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 AC092324.1-201ENST00000468671 324 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC3P19447 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC3P19447 GLUD1P3-202ENST00000508551 200 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AF186190.1-201ENST00000517470 480 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AC012400.1-201ENST00000518452 381 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC3P19447 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC3P19447 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 AK6P1-201ENST00000540219 478 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 MIR3167-201ENST00000579623 85 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AL669831.4-202ENST00000590817 238 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 BNIP3P33-201ENST00000598912 569 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AL139286.1-201ENST00000604465 483 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 AL031176.1-201ENST00000604554 466 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
ERCC3P19447 AC087385.3-201ENST00000620477 187 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC3P19447 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ERCC3P19447 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 MTCO1P9-201ENST00000505577 1534 ntBASIC6.03□□□□□ -1.44
ERCC3P19447 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ERCC3P19447 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC3P19447 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC3P19447 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
ERCC3P19447 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.02□□□□□ -1.45
ERCC3P19447 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.02□□□□□ -1.45
ERCC3P19447 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 AL049555.1-201ENST00000562834 1933 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ERCC3P19447 RNU6-1078P-201ENST00000364522 103 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 RNA5SP455-201ENST00000365190 119 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ERCC3P19447 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 CYB5AP4-201ENST00000396692 399 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 MIR1182-201ENST00000408363 97 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.02□□□□□ -1.45
ERCC3P19447 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.02□□□□□ -1.45
ERCC3P19447 MTCYBP24-201ENST00000420387 1106 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 MTCO1P20-201ENST00000425366 358 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.02□□□□□ -1.45
ERCC3P19447 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms