Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MIR8070-201ENST00000616510 88 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 AL356490.1-201ENST00000623079 479 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 AC107081.1-201ENST00000414975 361 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 TAF9P1-201ENST00000445421 515 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 TAF9P2-201ENST00000454958 515 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.52□□□□□ -2.01
SPTA1P02549 AC011602.1-201ENST00000546484 331 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 RPP40P2-201ENST00000603596 712 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.52□□□□□ -2.01
SPTA1P02549 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SPTA1P02549 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SPTA1P02549 RPS4XP5-202ENST00000449995 1334 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SPTA1P02549 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SPTA1P02549 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.51□□□□□ -2.01
SPTA1P02549 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.51□□□□□ -2.01
SPTA1P02549 AP004247.3-201ENST00000608682 624 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.51□□□□□ -2.01
SPTA1P02549 AL121882.1-201ENST00000422893 417 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.51□□□□□ -2.01
SPTA1P02549 HMGN1P18-201ENST00000457642 277 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 RPS6P4-201ENST00000494693 758 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.51□□□□□ -2.01
SPTA1P02549 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 RNA5SP217-201ENST00000515959 91 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 RN7SKP82-201ENST00000516786 223 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 RN7SKP282-201ENST00000516824 299 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 FAM60DP-201ENST00000524174 632 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 AP001646.1-201ENST00000527936 915 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 ISCA1P3-201ENST00000577104 373 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.51□□□□□ -2.01
SPTA1P02549 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.51□□□□□ -2.01
SPTA1P02549 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.51□□□□□ -2.01
SPTA1P02549 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
SPTA1P02549 AC004972.1-201ENST00000623934 2209 ntBASIC2.51□□□□□ -2.01
SPTA1P02549 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.5□□□□□ -2.01
SPTA1P02549 AC008725.1-201ENST00000605123 2263 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.5□□□□□ -2.01
SPTA1P02549 AC117529.2-201ENST00000512159 2068 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SPTA1P02549 SNORD114-1-201ENST00000362705 72 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.5□□□□□ -2.01
SPTA1P02549 RPL23AP71-201ENST00000470966 469 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 RPL5P16-201ENST00000471467 790 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 AC090543.2-201ENST00000483963 348 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.5□□□□□ -2.01
SPTA1P02549 MIR2276-201ENST00000516886 89 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.5□□□□□ -2.01
SPTA1P02549 AC103968.1-201ENST00000557841 573 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.5□□□□□ -2.01
SPTA1P02549 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.5□□□□□ -2.01
SPTA1P02549 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SPTA1P02549 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SPTA1P02549 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.5□□□□□ -2.01
SPTA1P02549 PRELID3BP7-201ENST00000503606 469 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.5□□□□□ -2.01
SPTA1P02549 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.5□□□□□ -2.01
SPTA1P02549 AC022882.1-201ENST00000532142 501 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SPTA1P02549 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.5□□□□□ -2.01
SPTA1P02549 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.5□□□□□ -2.01
SPTA1P02549 NSRP1P1-201ENST00000444067 1693 ntBASIC2.5□□□□□ -2.01
SPTA1P02549 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SPTA1P02549 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SPTA1P02549 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.49□□□□□ -2.01
SPTA1P02549 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.49□□□□□ -2.01
SPTA1P02549 RNU1-89P-201ENST00000384592 164 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.49□□□□□ -2.01
SPTA1P02549 SNRPGP9-201ENST00000456025 225 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AC090695.1-201ENST00000561269 1222 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.49□□□□□ -2.01
SPTA1P02549 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.49□□□□□ -2.01
SPTA1P02549 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.49□□□□□ -2.01
SPTA1P02549 AL592494.2-201ENST00000425455 1548 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AC000123.3-201ENST00000624029 4975 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 RNU6-253P-201ENST00000384730 105 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 ATF1P1-201ENST00000406040 927 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 RN7SKP58-201ENST00000411010 305 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.49□□□□□ -2.01
SPTA1P02549 AL590639.1-201ENST00000456484 337 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 MTCYBP14-201ENST00000457471 715 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AC108860.1-201ENST00000484521 383 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.49□□□□□ -2.01
SPTA1P02549 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.49□□□□□ -2.01
SPTA1P02549 AC233280.2-201ENST00000603917 1070 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AP003117.2-201ENST00000606010 545 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 AF117829.1-206ENST00000621883 3802 ntBASIC2.49□□□□□ -2.01
SPTA1P02549 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.49□□□□□ -2.01
SPTA1P02549 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SPTA1P02549 AC104454.1-201ENST00000421341 1401 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SPTA1P02549 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
SPTA1P02549 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.48□□□□□ -2.01
SPTA1P02549 AC078817.1-201ENST00000492623 435 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.48□□□□□ -2.01
SPTA1P02549 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms