Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPL7AP28-201ENST00000464513 571 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC013828.1-201ENST00000481845 158 ntBASIC3.77□□□□□ -1.81
PRKNO60260 OR2A20P-203ENST00000498397 1268 ntBASIC3.77□□□□□ -1.81
PRKNO60260 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
PRKNO60260 AC025554.1-201ENST00000505641 188 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC005178.1-201ENST00000508392 440 ntBASIC3.77□□□□□ -1.81
PRKNO60260 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 FTH1P21-201ENST00000512179 511 ntBASIC3.77□□□□□ -1.81
PRKNO60260 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 SOD1P3-201ENST00000518682 454 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRKNO60260 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 OR8R1P-201ENST00000543943 764 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 AC007954.1-201ENST00000554198 494 ntBASIC3.77□□□□□ -1.81
PRKNO60260 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 AC007599.1-201ENST00000568688 1174 ntBASIC3.77□□□□□ -1.81
PRKNO60260 MTND6P33-201ENST00000571794 183 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC025627.2-201ENST00000576220 160 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.77□□□□□ -1.81
PRKNO60260 HSPE1P14-201ENST00000605812 302 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC091946.2-201ENST00000606105 291 ntBASIC3.77□□□□□ -1.81
PRKNO60260 MIR6868-201ENST00000611215 58 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC024941.1-201ENST00000612250 334 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC092140.2-201ENST00000618027 521 ntBASIC3.77□□□□□ -1.81
PRKNO60260 Z69908.1-201ENST00000622603 247 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRKNO60260 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PRKNO60260 CR381670.1-201ENST00000624291 1693 ntBASIC3.77□□□□□ -1.81
PRKNO60260 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PRKNO60260 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.76□□□□□ -1.81
PRKNO60260 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 RNU6-251P-201ENST00000363235 104 ntBASIC3.76□□□□□ -1.81
PRKNO60260 Y_RNA.126-201ENST00000363382 111 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RNA5SP391-201ENST00000363456 119 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RNA5SP513-201ENST00000364648 118 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RNU6-657P-201ENST00000383904 107 ntBASIC3.76□□□□□ -1.81
PRKNO60260 Y_RNA.436-201ENST00000384097 102 ntBASIC3.76□□□□□ -1.81
PRKNO60260 MIR513A2-201ENST00000385249 127 ntBASIC3.76□□□□□ -1.81
PRKNO60260 DSTNP4-201ENST00000399472 474 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AL031577.2-201ENST00000404133 280 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AL121834.1-202ENST00000404494 277 ntBASIC3.76□□□□□ -1.81
PRKNO60260 HNRNPDP2-201ENST00000406475 478 ntBASIC3.76□□□□□ -1.81
PRKNO60260 USP9YP33-201ENST00000412220 421 ntBASIC3.76□□□□□ -1.81
PRKNO60260 BTF3L4P1-201ENST00000413813 468 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.76□□□□□ -1.81
PRKNO60260 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 AL590103.1-201ENST00000434488 307 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 USP9YP35-201ENST00000435696 412 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AL117351.1-201ENST00000438864 766 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RPL21P89-201ENST00000444021 467 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 AC009961.3-201ENST00000449832 765 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 OR6C5P-201ENST00000452388 923 ntBASIC3.76□□□□□ -1.81
PRKNO60260 HMGB3P21-201ENST00000452483 547 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 RAD23BP3-201ENST00000454157 1152 ntBASIC3.76□□□□□ -1.81
PRKNO60260 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RPL5P30-201ENST00000465511 891 ntBASIC3.76□□□□□ -1.81
PRKNO60260 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 RPS26P28-201ENST00000470806 348 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RPS6P4-201ENST00000494693 758 ntBASIC3.76□□□□□ -1.81
PRKNO60260 RPL30P11-201ENST00000495304 339 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AC080014.1-201ENST00000496877 1201 ntBASIC3.76□□□□□ -1.81
PRKNO60260 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKNO60260 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 AL121766.1-201ENST00000547436 487 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 AC011260.1-201ENST00000578420 472 ntBASIC3.76□□□□□ -1.81
PRKNO60260 MIR4512-201ENST00000583257 77 ntBASIC3.76□□□□□ -1.81
PRKNO60260 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 AC073114.1-201ENST00000612027 490 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AL158196.1-201ENST00000616786 434 ntBASIC3.76□□□□□ -1.81
PRKNO60260 MIR6875-201ENST00000617506 72 ntBASIC3.76□□□□□ -1.81
PRKNO60260 AL031667.3-201ENST00000620124 655 ntBASIC3.76□□□□□ -1.81
PRKNO60260 MIR7702-201ENST00000621931 59 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms