Protein–RNA interactions for Protein: C9JLJ4

USP17L13, Ubiquitin carboxyl-terminal hydrolase 17-like protein 13, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L13C9JLJ4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 RNU6-641P-201ENST00000384006 107 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 RPS11P7-201ENST00000442125 465 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 RPS29P15-201ENST00000458329 171 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC126389.1-201ENST00000477436 290 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 KLHL2P1-201ENST00000508691 521 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC004062.1-201ENST00000509926 645 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 Y_RNA.665-201ENST00000516177 98 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC128657.1-201ENST00000549459 145 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 RPL10P14-201ENST00000565265 298 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AP005403.1-201ENST00000579720 229 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC006504.6-201ENST00000590142 199 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC025588.3-201ENST00000604182 274 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AC103710.2-201ENST00000609912 942 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AL590099.1-201ENST00000615276 138 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AL442128.2-201ENST00000620246 1824 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 AP004289.2-201ENST00000444413 1457 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 NXPH1-205ENST00000602349 1953 ntBASIC6.33□□□□□ -1.4
USP17L13C9JLJ4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC002525.1-201ENST00000624392 1622 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 OR55B1P-203ENST00000641518 2602 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RNU6-552P-201ENST00000362869 119 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 SNORA62.1-201ENST00000364287 154 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 Y_RNA.259-201ENST00000364619 101 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RNU2-21P-201ENST00000410368 188 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 MTCO2P27-201ENST00000420740 428 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RPL12P17-201ENST00000432393 498 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 PSMD10P3-201ENST00000437000 448 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC073850.1-201ENST00000449243 255 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 SNORD121B-201ENST00000458838 81 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RPL23AP11-201ENST00000475260 469 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 MTCO1P29-201ENST00000496868 288 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC020893.1-201ENST00000502452 580 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC116562.3-201ENST00000506136 177 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RNU2-10P-201ENST00000516375 211 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RPL7P20-201ENST00000520308 745 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC068587.5-201ENST00000528506 175 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AL031666.3-201ENST00000609320 1006 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 Mico1.1-201ENST00000611698 204 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AP002799.1-201ENST00000623552 423 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 CYP4F35P-202ENST00000636121 390 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AP000550.3-201ENST00000637734 379 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 AC138907.8-201ENST00000623981 2256 ntBASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
USP17L13C9JLJ4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.31□□□□□ -1.4
USP17L13C9JLJ4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms