Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC122688.1-201ENST00000541494 223 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 MIR4790-201ENST00000577799 79 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 MIR5690-201ENST00000583739 73 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC011500.1-201ENST00000601963 469 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC009779.8-202ENST00000607990 932 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC133104.2-201ENST00000615272 193 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AL512652.1-201ENST00000619006 500 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 OR4F13P-202ENST00000560066 2054 ntBASIC4.98□□□□□ -1.61
SHISA3A0PJX4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.98□□□□□ -1.61
SHISA3A0PJX4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AL442639.1-201ENST00000625030 1899 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 Y_RNA.31-201ENST00000362574 102 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RNU1-134P-201ENST00000362935 165 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RN7SKP250-201ENST00000363924 321 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AL356057.3-201ENST00000402607 340 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RNU4-46P-201ENST00000410818 138 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RNU6-387P-201ENST00000411331 105 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AL591848.1-201ENST00000413092 322 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 SNRPEP4-201ENST00000435815 279 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC023141.3-201ENST00000436698 278 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 FABP5P14-201ENST00000437273 393 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RPL32P28-201ENST00000443577 397 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 Z95327.1-201ENST00000446082 482 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AL031584.1-201ENST00000447169 754 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 Y_RNA.653-201ENST00000459091 95 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 SNORD97-201ENST00000459187 142 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 MTCYBP40-201ENST00000509390 1135 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 ZNF519P4-201ENST00000514008 125 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RPS27AP18-201ENST00000515536 459 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RN7SKP24-201ENST00000515888 284 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RNA5SP454-201ENST00000517231 127 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 FAM60DP-201ENST00000524174 632 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AP000859.1-201ENST00000525536 307 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AP000763.2-201ENST00000540641 163 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 MT1CP-201ENST00000567054 174 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 MIR4701-201ENST00000583094 63 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC124312.5-201ENST00000604451 268 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC113194.1-201ENST00000606037 500 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 MIR6780B-201ENST00000610307 79 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AL627230.1-201ENST00000613077 211 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC116447.1-201ENST00000613153 453 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC025034.2-201ENST00000623264 286 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AC055839.1-201ENST00000634467 498 ntBASIC4.97□□□□□ -1.61
SHISA3A0PJX4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.97□□□□□ -1.61
SHISA3A0PJX4 AP000756.2-201ENST00000624168 2567 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms