Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL136531.3-201ENST00000624378 3658 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RNA5SP333-201ENST00000363466 118 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RNA5SP334-201ENST00000364825 118 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL591034.2-201ENST00000402839 359 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RN7SKP188-201ENST00000410789 317 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RPS21P8-201ENST00000413365 247 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 MICG-208ENST00000416822 132 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RPL36P18-201ENST00000419316 318 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL159987.2-201ENST00000432754 307 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 HMGB3P24-201ENST00000433260 622 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 SNRPBP1-201ENST00000443634 282 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RPL31P60-201ENST00000478450 367 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RPS10P28-201ENST00000480396 498 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 RPL7AP30-201ENST00000482859 796 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC023818.1-201ENST00000498379 384 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 Y_RNA.679-201ENST00000516416 91 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 SNRPCP6-201ENST00000528310 210 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL442163.3-201ENST00000554110 156 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 CPDP1-201ENST00000579660 283 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC063977.7-201ENST00000594454 337 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AC241377.1-201ENST00000619797 406 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL121985.3-201ENST00000620690 523 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 AL589994.2-201ENST00000621124 579 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 SNORA16A-202ENST00000628458 135 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ZNF299P-201ENST00000406845 1804 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 SHQ1P1-201ENST00000437111 1544 ntBASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS9D1Q9Y2B5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AL606537.1-201ENST00000607258 2011 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RNA5SP188-201ENST00000362916 129 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RNU6-923P-201ENST00000364753 107 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RNA5SP302-201ENST00000364896 100 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 SMIM11P1-201ENST00000369586 178 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RNU6-449P-201ENST00000383914 107 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 Y_RNA.480-201ENST00000384364 102 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 MIR138-2-201ENST00000384916 84 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RNA5SP35-201ENST00000391257 129 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 LDHAP5-201ENST00000394996 622 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 Y_RNA.590-201ENST00000410140 107 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 PPIAP23-201ENST00000420099 497 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 HSPD1P21-201ENST00000436541 245 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC016925.1-201ENST00000458303 298 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RPL7AP23-201ENST00000482625 776 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC083906.1-201ENST00000509298 406 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC060775.1-201ENST00000518241 520 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC005951.2-201ENST00000576282 495 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 FAM60BP-201ENST00000578364 658 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 MIR378C-201ENST00000578683 81 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC012119.1-201ENST00000603184 222 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 RNU6-85P-201ENST00000605989 107 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 HSPA8P4-201ENST00000511877 1920 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 AC097063.1-201ENST00000426714 1797 ntBASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS9D1Q9Y2B5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms