Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RAD23BP1-201ENST00000421404 1227 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AL732292.1-201ENST00000426692 226 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 RPS3AP54-201ENST00000435535 734 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 LARP1BP3-201ENST00000437229 869 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 MTND2P4-201ENST00000445034 1004 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 S100A11P1-201ENST00000477525 312 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 RPS4XP15-201ENST00000489210 795 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC078817.1-201ENST00000492623 435 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 DSTNP2-201ENST00000504533 515 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN1Q9P244 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 RN7SL652P-201ENST00000577769 300 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 MIR544B-201ENST00000582372 78 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 MIR5096-201ENST00000583713 70 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 PIGPP4-201ENST00000584447 307 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 AF131215.7-201ENST00000602443 707 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC233280.2-201ENST00000603917 1070 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AC080013.6-201ENST00000606185 215 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN1Q9P244 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 OR11H5P-202ENST00000641612 1325 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN1Q9P244 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN1Q9P244 Z98755.1-201ENST00000407015 1384 ntBASIC4.36□□□□□ -1.71
LRFN1Q9P244 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN1Q9P244 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN1Q9P244 MAPK10-286ENST00000641208 8747 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRFN1Q9P244 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRFN1Q9P244 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC008033.1-201ENST00000216407 1162 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 RNU6-501P-201ENST00000364072 100 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 RNU6-359P-201ENST00000365466 108 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC092447.6-201ENST00000414578 210 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL645608.4-201ENST00000423619 154 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 CHIAP3-201ENST00000423668 1133 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 RPL35AP21-201ENST00000437667 333 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL512286.1-201ENST00000439244 400 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 MTND1P30-201ENST00000441241 901 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 TDGF1P1-201ENST00000445734 527 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 ARL2BPP10-201ENST00000446487 531 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AP000542.1-201ENST00000448473 371 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 snoU13.8-201ENST00000458890 104 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AP000873.1-201ENST00000463987 400 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL591473.1-201ENST00000464297 313 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRFN1Q9P244 PRELID3BP7-201ENST00000503606 469 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AK3P4-201ENST00000504283 583 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 RNA5SP464-201ENST00000516251 108 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 RNA5SP360-201ENST00000516555 118 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 RPL23AP53-201ENST00000521854 457 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC023161.2-201ENST00000551218 780 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 PARP1P2-201ENST00000556806 195 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC008507.1-201ENST00000587506 734 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 BNIP3P23-201ENST00000599655 511 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL590229.1-201ENST00000603497 542 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 BCRP9-201ENST00000605312 388 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC011816.2-201ENST00000607089 556 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC064807.4-201ENST00000607201 407 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL513185.3-201ENST00000433335 1300 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC135352.1-201ENST00000506173 1418 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 ZNF833P-201ENST00000424938 1494 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC006378.2-201ENST00000623178 2476 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL022393.1-201ENST00000625142 1677 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 AL136164.3-201ENST00000624429 3978 ntBASIC4.35□□□□□ -1.71
LRFN1Q9P244 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRFN1Q9P244 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRFN1Q9P244 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms