Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 TAF9BP2-201ENST00000400856 499 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 RN7SKP263-201ENST00000411194 309 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 MTND5P28-201ENST00000438005 1594 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 UBE2V1P5-201ENST00000440070 405 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 RPL21P23-201ENST00000446654 460 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 ZNF37BP-203ENST00000452306 1352 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 RPL21P13-201ENST00000488305 481 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC117529.2-201ENST00000512159 2068 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 CIR1P1-201ENST00000524055 1133 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AL163153.1-201ENST00000554223 283 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 MTCYBP28-201ENST00000566728 1132 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 OR4G1P-201ENST00000588632 938 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC008687.2-201ENST00000597865 520 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AL451074.6-201ENST00000608512 729 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC107294.3-201ENST00000609211 526 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC006023.2-201ENST00000609916 167 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AL591516.1-201ENST00000611326 274 ntBASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 ZNF90P1-201ENST00000480493 1951 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AP001350.1-201ENST00000601906 1524 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RNU6-629P-201ENST00000384061 103 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RN7SKP159-201ENST00000410657 292 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RNU2-71P-201ENST00000411395 189 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RAB9AP3-201ENST00000412737 573 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC012498.1-201ENST00000424037 437 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC092641.1-201ENST00000440229 772 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RPL7P52-201ENST00000449200 742 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RAB9AP1-201ENST00000449393 573 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RPL26P28-201ENST00000451325 435 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RPL5P24-201ENST00000463742 885 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC103987.1-201ENST00000473394 348 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 SYPL1P1-201ENST00000473622 768 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RPL7P38-201ENST00000488396 739 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 MTND4LP22-201ENST00000508209 276 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC008565.1-201ENST00000509046 885 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC008885.2-201ENST00000509506 930 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AP004371.1-201ENST00000525240 214 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC005951.1-201ENST00000576706 485 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC091488.1-201ENST00000604239 660 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 U3.45-201ENST00000607547 219 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC018926.3-201ENST00000618841 406 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC243312.2-201ENST00000623340 601 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPAQ9P0L0 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
VAPAQ9P0L0 FAM35CP-201ENST00000554755 2470 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL122126.1-201ENST00000546905 1318 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 CYCSP19-201ENST00000411715 316 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 RPL7P46-201ENST00000425129 740 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms