Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC100830.2-201ENST00000581636 240 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 RN7SL66P-201ENST00000582099 264 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 DHX40P1-201ENST00000588725 1412 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL512782.1-201ENST00000603093 364 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC245389.1-201ENST00000605141 529 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 CTHRC1P1-201ENST00000605383 469 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL355816.1-201ENST00000607951 118 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 uc_338.31-201ENST00000615595 186 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC109583.2-201ENST00000617367 129 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 MIR6823-201ENST00000622118 61 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 uc_338.22-201ENST00000622722 187 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 AL078596.1-201ENST00000624856 447 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 CYP3A51P-201ENST00000633513 256 ntBASIC5.44□□□□□ -1.54
SSU72Q9NP77 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.44□□□□□ -1.54
SSU72Q9NP77 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSU72Q9NP77 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 OR9K1P-202ENST00000641111 3217 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC130650.2-201ENST00000618736 2403 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 OR1S2-201ENST00000302592 978 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AL139276.1-201ENST00000311910 1001 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 RNU5E-8P-201ENST00000363502 116 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 Y_RNA.234-201ENST00000364409 97 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 RNU6-639P-201ENST00000384074 107 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 MIR454-201ENST00000390180 115 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 RNU6-308P-201ENST00000390957 107 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 SNORD37.1-201ENST00000390968 65 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 RN7SKP235-201ENST00000410662 305 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 BX323014.1-201ENST00000412876 237 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AKR1B10P1-201ENST00000425765 942 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 MTATP6P16-201ENST00000434543 526 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 HMGB3P11-201ENST00000440127 604 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC114495.1-201ENST00000441274 436 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 PA2G4P1-201ENST00000442248 1197 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC104073.1-201ENST00000451988 151 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AL049714.1-201ENST00000466686 347 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 RPL29P23-201ENST00000486188 442 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 RNU6-513P-201ENST00000516104 104 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 RNU6-864P-201ENST00000516256 108 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 RNA5SP92-201ENST00000516437 110 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AP000648.1-201ENST00000529682 397 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 APOOP3-201ENST00000536787 586 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC018630.1-201ENST00000541376 925 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AL118558.2-201ENST00000556294 238 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC022884.2-201ENST00000578535 580 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC060771.1-201ENST00000582031 164 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 MIR3942-201ENST00000585264 109 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 VN1R107P-201ENST00000601784 209 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AL049794.2-201ENST00000616301 365 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AL159972.1-201ENST00000625150 448 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 AC073869.10-201ENST00000642016 354 ntBASIC5.43□□□□□ -1.54
SSU72Q9NP77 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.43□□□□□ -1.54
SSU72Q9NP77 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSU72Q9NP77 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC125336.1-201ENST00000508893 2827 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms