Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC103881.1-201ENST00000603476 538 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC010591.1-201ENST00000603941 649 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL365503.1-201ENST00000605247 905 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AP004247.3-201ENST00000608682 624 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC110801.1-201ENST00000623590 212 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 HPVC1-201ENST00000629899 1198 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL672296.1-201ENST00000427780 2158 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 RNU6-339P-201ENST00000384310 107 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MTCO3P31-201ENST00000405526 789 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 CYCSP19-201ENST00000411715 316 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 RPL17P36-201ENST00000420302 549 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MRPS31P2-201ENST00000451581 518 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 NECAP1P2-201ENST00000455668 727 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MTND4LP31-201ENST00000514859 294 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AP000916.1-201ENST00000533869 835 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC074051.3-201ENST00000570238 358 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MIR3186-201ENST00000577404 85 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC006254.3-201ENST00000603353 884 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 DPRXP5-201ENST00000604662 539 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 VN1R9P-201ENST00000614184 867 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AL354696.1-201ENST00000614652 497 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 U4.6-201ENST00000621618 127 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC092628.2-201ENST00000622492 339 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC106730.3-201ENST00000624568 641 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 AC073055.1-201ENST00000456901 1621 ntBASIC3.55□□□□□ -1.84
LRRC40Q9H9A6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AC116096.1-201ENST00000566804 2314 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 MIR591-201ENST00000385290 95 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 RNU6-55P-201ENST00000411092 107 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 RNU6-954P-201ENST00000411355 107 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 DBIP2-201ENST00000419076 262 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AL121882.1-201ENST00000422893 417 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AC233981.1-201ENST00000423224 461 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 CYCSP4-201ENST00000429682 331 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AL035246.1-201ENST00000433554 1255 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AL500527.1-201ENST00000448532 255 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 RPL7P55-201ENST00000450522 746 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 SLC31A1P1-201ENST00000451221 567 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 RPL12P26-201ENST00000452430 487 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AC073387.1-201ENST00000453261 709 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 AC007967.1-201ENST00000455422 1159 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 CYCSP20-201ENST00000473154 315 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 ACTR3P3-201ENST00000480448 893 ntBASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
LRRC40Q9H9A6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms