Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 GABRG2-229ENST00000641017 3628 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 MIR504-201ENST00000385065 83 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 SEPT7P2-202ENST00000398921 823 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 RNA5SP107-201ENST00000411358 122 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 RN7SL442P-201ENST00000473804 320 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 AP001646.1-201ENST00000527936 915 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SCAPERQ9BY12 ZNF542P-204ENST00000482727 1305 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 ZNF658B-202ENST00000615961 3375 ntBASIC4.24□□□□□ -1.73
SCAPERQ9BY12 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC063923.1-201ENST00000478982 1619 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 RNA5SP383-201ENST00000362934 120 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 SNORD56.3-201ENST00000363507 71 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 RPL32P35-201ENST00000415214 394 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC245291.1-201ENST00000419501 328 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC006960.1-201ENST00000419980 153 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC125238.1-201ENST00000448842 249 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AL356490.1-201ENST00000623079 479 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC067852.7-201ENST00000623270 535 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC066616.2-201ENST00000559334 1481 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AC009313.2-201ENST00000417893 1941 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 AL049555.1-201ENST00000562834 1933 ntBASIC4.23□□□□□ -1.73
SCAPERQ9BY12 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
SCAPERQ9BY12 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCAPERQ9BY12 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCAPERQ9BY12 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.22□□□□□ -1.73
SCAPERQ9BY12 AC025260.1-201ENST00000548858 430 ntBASIC4.22□□□□□ -1.73
SCAPERQ9BY12 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.22□□□□□ -1.73
SCAPERQ9BY12 ELL2P4-201ENST00000446870 1376 ntBASIC4.22□□□□□ -1.73
SCAPERQ9BY12 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCAPERQ9BY12 EI24P2-201ENST00000397776 1076 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 AL356057.3-201ENST00000402607 340 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 B3GNT2P1-201ENST00000434960 952 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 AC105402.2-201ENST00000438503 358 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.21□□□□□ -1.73
SCAPERQ9BY12 HMGB3P6-201ENST00000444896 598 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.21□□□□□ -1.73
SCAPERQ9BY12 snoU13.15-201ENST00000459407 104 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SCAPERQ9BY12 OR5H3P-201ENST00000502817 919 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 AP003122.3-201ENST00000526316 255 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 SERPINE4P-201ENST00000554978 281 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 KC877982.1-201ENST00000602313 470 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.21□□□□□ -1.73
SCAPERQ9BY12 AL450472.3-201ENST00000615578 367 ntBASIC4.21□□□□□ -1.73
SCAPERQ9BY12 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AL450326.2-201ENST00000421913 1962 ntBASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 RNU2-22P-201ENST00000411266 212 ntBASIC4.21□□□□□ -1.74
SCAPERQ9BY12 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 RN7SKP283-201ENST00000517197 270 ntBASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AC068657.1-201ENST00000520807 306 ntBASIC4.21□□□□□ -1.74
SCAPERQ9BY12 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.21□□□□□ -1.74
SCAPERQ9BY12 AC092608.2-201ENST00000624427 218 ntBASIC4.21□□□□□ -1.74
SCAPERQ9BY12 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AC093908.1-201ENST00000623125 8092 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 PTP4A1P5-201ENST00000420305 455 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AC021205.1-201ENST00000468797 348 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 RPL23AP44-201ENST00000482216 473 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 SNORA64.4-201ENST00000516632 81 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 SNORA31.21-201ENST00000517180 77 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AC090819.1-201ENST00000523800 1111 ntBASIC4.2□□□□□ -1.74
SCAPERQ9BY12 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAPERQ9BY12 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms