Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL139095.3-201ENST00000419672 1203 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AL049610.1-201ENST00000423374 372 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 OR51AB1P-201ENST00000429046 620 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 PSMA2P3-201ENST00000429685 675 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 RPL23AP74-201ENST00000437246 471 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 ARPC3P2-201ENST00000457786 533 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 DSTNP2-201ENST00000504533 515 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 HSPE1P3-201ENST00000559254 309 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 MIR4458-201ENST00000578872 75 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 YWHAQP7-201ENST00000603536 658 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AL358072.1-201ENST00000604156 575 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC090948.1-201ENST00000607464 549 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC026368.1-201ENST00000614934 690 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 AC016588.2-201ENST00000632484 3021 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 OR56B2P-202ENST00000641377 2453 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 GDI2P1-201ENST00000429312 1336 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AP002907.1-201ENST00000606361 1430 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 MIR331-201ENST00000362302 94 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 RNU6-374P-201ENST00000364146 108 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 SNORD116-9-201ENST00000384000 95 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 SNORD116-3-201ENST00000384287 95 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 SNORD116-7-201ENST00000384404 95 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 SNORD116-5-201ENST00000384462 95 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ARF4P3-201ENST00000397387 509 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL121972.1-201ENST00000402023 252 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL160275.2-201ENST00000412010 394 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL356387.2-201ENST00000422272 243 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 EIF4EP1-201ENST00000422311 642 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ZYG11AP1-201ENST00000430329 837 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 MED14P1-201ENST00000430517 648 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 UBE2FP3-201ENST00000436366 524 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 PHBP16-201ENST00000446318 950 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 RPL7P31-201ENST00000450192 724 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 MEMO1P3-201ENST00000459811 302 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL136126.1-201ENST00000473603 402 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 RPS6P4-201ENST00000494693 758 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC108941.1-201ENST00000502853 530 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC008802.1-201ENST00000519121 791 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 LARP7P2-201ENST00000575306 125 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 MIR3138-201ENST00000585238 82 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 NBR2-204ENST00000587322 63 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC090181.2-201ENST00000602975 672 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AL009028.1-201ENST00000604895 802 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC064807.4-201ENST00000607201 407 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 MIR7154-201ENST00000620673 73 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 AC000123.2-201ENST00000623124 461 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 CR381670.1-201ENST00000624291 1693 ntBASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP4CQ96CF2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP4CQ96CF2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms