Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNA5SP283-201ENST00000365604 119 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 MT-TH-201ENST00000387441 69 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AL583835.1-201ENST00000399570 407 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 NPM1P11-201ENST00000417106 855 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AL035410.1-201ENST00000427409 427 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 OR51AB1P-201ENST00000429046 620 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC244035.1-201ENST00000430042 390 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC129850.1-201ENST00000436203 508 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC009961.3-201ENST00000449832 765 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC109486.1-201ENST00000486833 374 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 RN7SL812P-201ENST00000493791 279 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC093767.1-201ENST00000504523 156 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 DSTNP2-201ENST00000504533 515 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC020593.1-201ENST00000507399 299 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 SAP18P1-201ENST00000512058 390 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 ROCK1P1-201ENST00000573767 549 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 OR4G1P-201ENST00000588632 938 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC040904.1-201ENST00000590850 223 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC080013.4-201ENST00000607624 649 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AL513477.2-201ENST00000607858 568 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 AC006927.3-201ENST00000638789 384 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.4□□□□□ -1.71
HMGB4Q8WW32 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
HMGB4Q8WW32 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 Z95327.2-201ENST00000414579 1873 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 Y_RNA.77-201ENST00000362962 107 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC019155.1-201ENST00000382242 574 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 RNU6-730P-201ENST00000383954 104 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC007066.1-201ENST00000392902 381 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 PPIAP31-201ENST00000405422 495 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 TPMTP3-201ENST00000411928 735 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 RPL7P8-201ENST00000411964 730 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 BX119904.4-201ENST00000424402 301 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 VN1R108P-201ENST00000431580 830 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 NMNAT1P2-201ENST00000435192 860 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AL117351.1-201ENST00000438864 766 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 UBE2V1P3-201ENST00000439651 417 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 Z95327.1-201ENST00000446082 482 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 RPL30P9-201ENST00000465586 330 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 PLGLA-201ENST00000465668 449 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC022034.3-201ENST00000471393 478 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AL132838.2-201ENST00000492041 314 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AL024509.2-201ENST00000493462 493 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC080014.1-201ENST00000496877 1201 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 HIGD1AP3-201ENST00000515857 278 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC023632.4-201ENST00000517783 191 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 ACTR3BP3-201ENST00000565577 979 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC091178.1-203ENST00000584586 279 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms