Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC106754.1-201ENST00000562632 1513 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL122126.1-201ENST00000546905 1318 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MTND5P31-201ENST00000419366 1374 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 ANKRD36P1-201ENST00000344424 659 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-263P-201ENST00000363811 107 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-224P-201ENST00000384055 107 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-921P-201ENST00000384361 107 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RNA5SP424-201ENST00000390988 115 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 VN1R51P-201ENST00000411675 945 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL136133.1-201ENST00000413694 376 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL139128.1-201ENST00000413921 941 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC027644.1-201ENST00000419595 298 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC233981.1-201ENST00000423224 461 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 OSTCP5-201ENST00000425293 453 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 C1DP1-201ENST00000426049 402 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC004854.1-201ENST00000440356 349 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 EXOSC3P1-201ENST00000448649 500 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC006539.3-201ENST00000454258 129 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RPL23AP44-201ENST00000482216 473 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RPS3AP50-201ENST00000487064 803 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC079203.1-201ENST00000487972 404 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RPL23AP55-201ENST00000498163 452 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 GTF2IP9-201ENST00000502460 301 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 UBE2V1P12-201ENST00000503954 474 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC025674.1-201ENST00000507074 324 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RAC1P2-201ENST00000511164 579 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 PHBP14-201ENST00000512887 367 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RNA5SP208-201ENST00000516156 78 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC092470.1-201ENST00000546187 132 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 MTCYBP23-201ENST00000558717 1102 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC074051.3-201ENST00000570238 358 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 RN7SL339P-201ENST00000580597 296 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL445435.1-201ENST00000604232 665 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AL356218.2-201ENST00000605264 187 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC011816.2-201ENST00000607089 556 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 PART1_2.1-201ENST00000612397 250 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC105227.2-201ENST00000615075 605 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC104985.3-201ENST00000623479 597 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 AC090772.4-201ENST00000623599 362 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.11□□□□□ -1.91
CCDC71LQ8N9Z2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AL359893.1-201ENST00000447628 1580 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RNVU1-6-201ENST00000364688 164 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RNA5SP505-201ENST00000364748 108 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RNA5SP235-201ENST00000365411 114 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 SNORD116-23-201ENST00000384645 92 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AL136116.1-201ENST00000403591 381 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AC016397.1-201ENST00000412463 242 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RPS7P9-201ENST00000414704 586 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 FCF1P2-201ENST00000415284 583 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RPS3AP9-201ENST00000417027 792 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RPL17P36-201ENST00000420302 549 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 COX6CP15-201ENST00000426313 211 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AL158071.1-201ENST00000430315 461 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 VDAC1P3-201ENST00000434069 851 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 MTCYBP42-201ENST00000444653 1130 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 HMGN3P1-201ENST00000453847 193 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AP002884.2-201ENST00000471647 395 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms