Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC011458.1-201ENST00000604034 617 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 HMGB1P50-201ENST00000605814 607 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 RNU6-730P-201ENST00000383954 104 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 RNU6-821P-201ENST00000390995 107 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 RPL31P1-201ENST00000398116 372 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL138880.1-201ENST00000405824 642 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 MTATP6P20-201ENST00000414147 562 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 LUZP4P1-201ENST00000415420 344 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL391219.1-201ENST00000422570 483 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC007327.1-201ENST00000447461 264 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL589880.1-201ENST00000448271 287 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 PTGES3P5-201ENST00000455109 434 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 RPL7P1-201ENST00000468161 747 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 RPL7P9-201ENST00000468715 747 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 RPL21P129-201ENST00000491732 478 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 SETP14-201ENST00000497538 873 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 SLC25A15P5-201ENST00000508033 253 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC109458.1-201ENST00000508858 316 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC090281.1-201ENST00000523019 276 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL389895.1-201ENST00000554127 252 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC012417.1-201ENST00000582307 1039 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC015688.2-201ENST00000584523 262 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 MIR5684-201ENST00000585074 65 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 MTCO2P2-201ENST00000591258 225 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AL606490.9-201ENST00000603331 271 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 CYP3A51P-201ENST00000633513 256 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 AC109315.1-201ENST00000584143 1347 ntBASIC4.14□□□□□ -1.75
PRPF39Q86UA1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF39Q86UA1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC027287.1-201ENST00000553115 1453 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 CDR1-202ENST00000625883 1485 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RNU6-989P-201ENST00000362756 107 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RNU1-89P-201ENST00000384592 164 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 MIR23B-201ENST00000384832 97 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AL136310.1-201ENST00000404926 654 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RPL7P53-201ENST00000421245 739 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 HMGB3P5-201ENST00000428894 612 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC004854.1-201ENST00000440356 349 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 OR10R1P-201ENST00000441524 1141 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 VN1R25P-201ENST00000443385 738 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RFC5P1-201ENST00000454419 874 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC092155.2-201ENST00000454675 477 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 VN1R40P-201ENST00000455196 941 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 VN1R105P-201ENST00000486595 910 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC069499.1-201ENST00000489433 509 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC110792.1-201ENST00000491826 472 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC020593.1-201ENST00000507399 299 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 SAP18P1-201ENST00000512058 390 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RNA5SP309-201ENST00000516670 106 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC023632.4-201ENST00000517783 191 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 OR7E13P-201ENST00000526052 910 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AL139174.1-201ENST00000531489 886 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AP000619.3-201ENST00000535634 1127 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AADACP1-206ENST00000561502 1193 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms