Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HSPE1P2-201ENST00000554777 306 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 MIR3684-201ENST00000579779 74 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.771-201ENST00000598668 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AC174048.1-201ENST00000603389 144 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 U1.41-201ENST00000617626 165 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 AL354718.1-201ENST00000619764 589 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 Y_RNA.789-201ENST00000622480 102 ntBASIC7.02□□□□□ -1.29
VARS2Q5ST30 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.02□□□□□ -1.29
VARS2Q5ST30 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARS2Q5ST30 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 PARP4P1-201ENST00000435945 2337 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC092821.3-202ENST00000641304 2767 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 RNU4-44P-201ENST00000363050 141 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 RNU6-326P-201ENST00000365480 107 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 DBIP1-201ENST00000401435 260 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 HMGN1P20-201ENST00000411849 300 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 DPPA2P2-201ENST00000418220 897 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC008753.1-201ENST00000423096 284 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AL590233.1-201ENST00000430017 456 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 COX4I1P2-201ENST00000447446 547 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 RNU7-138P-201ENST00000459479 64 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC007998.1-201ENST00000474156 672 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC104576.1-201ENST00000524225 88 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 Y_RNA.772-201ENST00000606692 102 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 Y_RNA.778-201ENST00000620203 90 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AL136313.1-201ENST00000624804 202 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 AC008873.1-201ENST00000625051 138 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 MIR4302-201ENST00000638058 60 ntBASIC7.01□□□□□ -1.29
VARS2Q5ST30 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
VARS2Q5ST30 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VARS2Q5ST30 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 Y_RNA.275-201ENST00000364726 110 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 RNU6-818P-201ENST00000364837 108 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 Y_RNA.308-201ENST00000365043 101 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 RNU6-147P-201ENST00000383983 107 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 Y_RNA.533-201ENST00000384596 114 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 RNU6-700P-201ENST00000391043 107 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7□□□□□ -1.29
VARS2Q5ST30 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7□□□□□ -1.29
VARS2Q5ST30 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 AC095057.1-201ENST00000507583 168 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC7□□□□□ -1.29
VARS2Q5ST30 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC7□□□□□ -1.29
VARS2Q5ST30 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC7□□□□□ -1.29
VARS2Q5ST30 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC7□□□□□ -1.29
VARS2Q5ST30 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 AC120057.2-201ENST00000571520 271 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7□□□□□ -1.29
VARS2Q5ST30 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
VARS2Q5ST30 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7□□□□□ -1.29
VARS2Q5ST30 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
VARS2Q5ST30 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
VARS2Q5ST30 AC112255.1-201ENST00000624070 2493 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms