Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC009643.2-201ENST00000603543 1448 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC108467.2-201ENST00000617640 1597 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 MIR23A-201ENST00000385245 73 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AL160275.2-201ENST00000412010 394 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL21P108-201ENST00000413857 481 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC009237.10-201ENST00000414112 510 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL23AP39-201ENST00000415533 405 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 TMBIM7P-201ENST00000418074 855 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL7AP25-201ENST00000423357 805 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPS29P17-201ENST00000430795 166 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC092162.1-201ENST00000432828 434 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL12P46-201ENST00000436610 195 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL35AP21-201ENST00000437667 333 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC005008.1-201ENST00000456151 612 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL21P126-201ENST00000470049 478 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPS15AP17-201ENST00000470598 390 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC090686.1-201ENST00000481577 749 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RPL21P129-201ENST00000491732 478 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC005726.1-201ENST00000494679 427 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC026412.2-201ENST00000512270 1075 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC006499.2-201ENST00000513470 337 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC105031.1-201ENST00000518550 476 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC093249.4-201ENST00000564755 259 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC106785.1-201ENST00000565935 262 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC107214.2-201ENST00000608204 634 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 MIR7844-201ENST00000616161 122 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 MIR6864-201ENST00000617935 70 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AC018816.2-201ENST00000621460 353 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 AP002907.1-201ENST00000606361 1430 ntBASIC4.8□□□□□ -1.64
SLC44A4Q53GD3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 ZFRP1-201ENST00000457579 2970 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 CR383658.2-201ENST00000547576 1525 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MIR134-201ENST00000385258 73 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 EIF5P1-201ENST00000400019 1231 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 Z98745.1-201ENST00000402553 494 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC069218.2-201ENST00000411665 344 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 NUP35P2-201ENST00000416748 943 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MTND1P23-201ENST00000416931 372 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 RPS3AP9-201ENST00000417027 792 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC073136.2-201ENST00000417282 849 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC096632.1-201ENST00000427395 310 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 ZYG11AP1-201ENST00000430329 837 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MTND6P18-201ENST00000439477 513 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AL031667.1-201ENST00000440222 725 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 RPL23AP16-201ENST00000441715 421 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 RPS26P56-201ENST00000444468 240 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC093899.1-201ENST00000457984 376 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MEMO1P3-201ENST00000459811 302 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC097493.1-201ENST00000463958 372 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AL136126.1-201ENST00000473603 402 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC104763.1-201ENST00000475274 360 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MTND6P6-201ENST00000478031 263 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 MIR2116-201ENST00000517221 80 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 CYCSP29-201ENST00000533731 318 ntBASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A4Q53GD3 AC012414.6-201ENST00000568241 401 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms