Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC006960.1-201ENST00000419980 153 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AC091390.1-201ENST00000433904 331 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.18□□□□□ -1.9
RFX4Q33E94 HMGB3P11-201ENST00000440127 604 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AL662791.1-201ENST00000441992 928 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 RPL23AP33-201ENST00000442301 452 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 HSFY3P-201ENST00000444242 1191 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 HMGB1P48-201ENST00000446155 598 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 MTND1P33-201ENST00000446251 917 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC008280.2-201ENST00000455473 307 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFX4Q33E94 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC068587.1-201ENST00000483613 781 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AC092902.1-201ENST00000486999 259 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
RFX4Q33E94 HMGN1P15-201ENST00000513870 295 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AL442163.2-201ENST00000553912 710 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC124283.4-201ENST00000581815 456 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 BNIP3P4-201ENST00000604946 565 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 MIR6864-201ENST00000617935 70 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC068724.3-201ENST00000625906 87 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 NSRP1P1-201ENST00000444067 1693 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC016716.1-201ENST00000265882 708 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AL512646.1-201ENST00000269395 1077 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 DNAJC19P6-201ENST00000401853 280 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 RN7SKP263-201ENST00000411194 309 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC005002.1-201ENST00000447458 540 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFX4Q33E94 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.17□□□□□ -1.9
RFX4Q33E94 U3.44-201ENST00000458938 192 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AL049829.1-201ENST00000465411 156 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC103987.1-201ENST00000473394 348 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.17□□□□□ -1.9
RFX4Q33E94 RPS4XP6-201ENST00000477670 797 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
RFX4Q33E94 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 RN7SKP21-201ENST00000516503 220 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX4Q33E94 MTND2P7-201ENST00000521337 640 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC092451.2-201ENST00000538746 658 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC010198.2-201ENST00000550612 259 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC095057.3-201ENST00000567102 1157 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC023824.3-201ENST00000569003 562 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC090312.2-201ENST00000582687 378 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.17□□□□□ -1.9
RFX4Q33E94 BNIP3P19-201ENST00000605397 577 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC099676.1-201ENST00000608886 657 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC112503.2-201ENST00000609005 552 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 AC005156.1-201ENST00000613371 573 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFX4Q33E94 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.17□□□□□ -1.9
RFX4Q33E94 AL356118.1-201ENST00000635272 1078 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFX4Q33E94 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
RFX4Q33E94 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFX4Q33E94 AC090337.1-201ENST00000579651 2074 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFX4Q33E94 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFX4Q33E94 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RFX4Q33E94 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFX4Q33E94 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFX4Q33E94 RSL24D1P1-201ENST00000404972 493 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 RPL31P2-201ENST00000413849 377 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 DEFB130D-201ENST00000426866 237 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 CKS1BP5-201ENST00000434172 273 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 YWHAZP8-201ENST00000436935 731 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC092170.1-201ENST00000440211 356 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AL929288.2-201ENST00000446368 407 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 Z99127.3-201ENST00000448158 395 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms