Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC092868.3-201ENST00000560515 784 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 MIR5186-201ENST00000577504 120 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC093227.2-201ENST00000589357 285 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AL359198.2-201ENST00000611836 194 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 RNU1-70P-201ENST00000362618 164 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 DEFB109C-201ENST00000382575 264 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 DEFB109B-201ENST00000382656 264 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AL357075.1-201ENST00000404107 726 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 SSXP9-201ENST00000417503 292 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC233728.2-201ENST00000425348 757 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 HMGN2P31-201ENST00000432430 273 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 XKRYP6-201ENST00000440468 1116 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 XKRYP3-201ENST00000442113 1116 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 RPL21P10-201ENST00000463521 490 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC005351.1-201ENST00000511152 786 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 HMGN1P15-201ENST00000513870 295 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC011611.1-201ENST00000552179 197 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 MTND4LP24-201ENST00000572277 291 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC012119.1-201ENST00000603184 222 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 MTCO2P22-201ENST00000603246 681 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC068831.7-201ENST00000616954 363 ntBASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HIST1H1AQ02539 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 RNU6-317P-201ENST00000384031 107 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 MIR200C-201ENST00000384980 68 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 RNU2-65P-201ENST00000410162 185 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 RNA5SP129-201ENST00000410276 118 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 RPL36AP36-201ENST00000418616 301 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 NIPA2P1-201ENST00000426223 976 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 PSMA2P3-201ENST00000429685 675 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 RPL23AP20-201ENST00000447965 421 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AL359073.1-201ENST00000448036 403 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 RN7SKP277-201ENST00000516895 283 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AADACP1-206ENST00000561502 1193 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 MIR3922-201ENST00000585192 84 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 PCNAP1-202ENST00000595299 752 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 SNORA35B-201ENST00000607417 129 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC004696.1-201ENST00000614345 607 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AL355365.1-201ENST00000616480 294 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AL133370.2-201ENST00000619934 439 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC022509.4-201ENST00000621404 572 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC039056.2-201ENST00000622261 511 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 AC007342.8-201ENST00000623278 678 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 FAM157B-203ENST00000639350 358 ntBASIC2.43□□□□□ -2.02
HIST1H1AQ02539 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HIST1H1AQ02539 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms