Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC138932.5-201ENST00000617759 563 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 MIR6864-201ENST00000617935 70 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H3F3AP84243 AC004777.1-201ENST00000624317 287 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 AC004972.1-201ENST00000623934 2209 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.86□□□□□ -1.95
H3F3AP84243 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.86□□□□□ -1.95
H3F3AP84243 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
H3F3AP84243 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
H3F3AP84243 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.85□□□□□ -1.95
H3F3AP84243 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
H3F3AP84243 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 U3.11-201ENST00000364476 212 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
H3F3AP84243 SNORA7.4-201ENST00000384249 137 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 RNU6-31P-201ENST00000384388 108 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.85□□□□□ -1.95
H3F3AP84243 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.85□□□□□ -1.95
H3F3AP84243 NUP35P2-201ENST00000416748 943 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 HIGD1AP11-201ENST00000438361 280 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC069540.1-201ENST00000446320 988 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC115115.1-201ENST00000449927 248 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 BX276092.4-201ENST00000452056 248 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC104308.1-201ENST00000454621 333 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.85□□□□□ -1.95
H3F3AP84243 AC108078.3-201ENST00000502633 489 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.85□□□□□ -1.95
H3F3AP84243 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
H3F3AP84243 AC108120.2-201ENST00000512973 294 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC010265.1-201ENST00000513509 211 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC245166.1-201ENST00000521012 253 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.85□□□□□ -1.95
H3F3AP84243 MTCYBP41-201ENST00000528913 1123 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 OR4H12P-201ENST00000556269 907 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.85□□□□□ -1.95
H3F3AP84243 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.85□□□□□ -1.95
H3F3AP84243 MIR5004-201ENST00000579078 107 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AC090616.5-202ENST00000582111 297 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.85□□□□□ -1.95
H3F3AP84243 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.85□□□□□ -1.95
H3F3AP84243 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.85□□□□□ -1.95
H3F3AP84243 MTND5P1-201ENST00000445440 1375 ntBASIC2.85□□□□□ -1.95
H3F3AP84243 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
H3F3AP84243 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H3F3AP84243 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H3F3AP84243 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
H3F3AP84243 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
H3F3AP84243 AC118273.1-201ENST00000525324 3006 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H3F3AP84243 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
H3F3AP84243 RPL7P26-201ENST00000333817 754 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AC244098.2-201ENST00000422068 99 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 TRIAP1P1-201ENST00000427062 225 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AL451062.2-201ENST00000427515 271 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.84□□□□□ -1.95
H3F3AP84243 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 RPL23AP69-201ENST00000431134 458 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AC007563.3-201ENST00000433233 371 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 VDAC1P3-201ENST00000434069 851 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AC006028.1-201ENST00000438379 402 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 MTCO3P17-201ENST00000443775 513 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AC023512.1-201ENST00000444513 499 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 TPTE2P6-202ENST00000445572 1007 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AL590399.6-201ENST00000446396 307 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 NF1P3-201ENST00000457709 450 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 RPL7P49-201ENST00000471402 708 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 TMEM248P1-201ENST00000510579 951 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 RNA5SP385-201ENST00000515947 110 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 RNU1-143P-201ENST00000516296 146 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AF279873.1-201ENST00000523393 313 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
H3F3AP84243 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.84□□□□□ -1.95
H3F3AP84243 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 MTCO3P24-201ENST00000572729 782 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.84□□□□□ -1.95
H3F3AP84243 AC006023.2-201ENST00000609916 167 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 U1.23-201ENST00000610293 146 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 RNU1-68P-201ENST00000615382 146 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.84□□□□□ -1.95
H3F3AP84243 U1.39-201ENST00000621562 146 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AC091903.1-201ENST00000624322 454 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.84□□□□□ -1.95
H3F3AP84243 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
H3F3AP84243 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
H3F3AP84243 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
H3F3AP84243 MTND4P34-201ENST00000572715 1371 ntBASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms