Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RPS4XP62701 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.48□□□□□ -1.85
RPS4XP62701 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RPS4XP62701 AL023807.1-201ENST00000407932 359 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.48□□□□□ -1.85
RPS4XP62701 OR4K6P-201ENST00000416478 897 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 MTCYBP24-201ENST00000420387 1106 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AC092832.1-201ENST00000422934 400 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 SDCBPP2-201ENST00000424643 885 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AL050321.1-201ENST00000432363 400 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 SEPT7P5-201ENST00000434048 306 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.48□□□□□ -1.85
RPS4XP62701 AC093155.1-201ENST00000440164 826 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RPS4XP62701 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RPS4XP62701 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 PNPLA4P1-201ENST00000458328 305 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AP000873.1-201ENST00000463987 400 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AC010301.1-201ENST00000473936 355 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 SNORA48.10-201ENST00000516965 160 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 IGKV2D-36-201ENST00000518643 226 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.48□□□□□ -1.85
RPS4XP62701 IGLVIV-53-201ENST00000520107 367 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 AC135001.1-201ENST00000544546 283 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.48□□□□□ -1.85
RPS4XP62701 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.48□□□□□ -1.85
RPS4XP62701 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.48□□□□□ -1.85
RPS4XP62701 AC011458.1-201ENST00000604034 617 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.48□□□□□ -1.85
RPS4XP62701 AL513477.2-201ENST00000607858 568 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AL121895.2-201ENST00000619558 447 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AL354798.1-201ENST00000622505 329 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 AC073530.2-201ENST00000623987 261 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RPS4XP62701 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 ZNF734P-201ENST00000419494 1534 ntBASIC3.48□□□□□ -1.85
RPS4XP62701 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPS4XP62701 OR11H5P-202ENST00000641612 1325 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RPS4XP62701 RNA5SP502-201ENST00000362694 119 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 snoZ40.1-201ENST00000364540 72 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 LUZP4P1-201ENST00000415420 344 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.47□□□□□ -1.85
RPS4XP62701 Z97055.1-201ENST00000419730 712 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MTCO3P1-205ENST00000422088 832 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 RPL21P109-201ENST00000422213 475 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.47□□□□□ -1.85
RPS4XP62701 HIGD1AP12-201ENST00000427832 281 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AL445584.1-201ENST00000431451 330 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.47□□□□□ -1.85
RPS4XP62701 USP9YP22-201ENST00000438971 294 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AL031313.1-201ENST00000448435 256 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 EXOSC3P1-201ENST00000448649 500 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AL034418.1-201ENST00000448675 860 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.47□□□□□ -1.85
RPS4XP62701 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.47□□□□□ -1.85
RPS4XP62701 AC113420.1-201ENST00000507903 571 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AC113347.3-201ENST00000509113 148 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.47□□□□□ -1.85
RPS4XP62701 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.47□□□□□ -1.85
RPS4XP62701 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.47□□□□□ -1.85
RPS4XP62701 AC027309.2-201ENST00000520566 192 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 SUMO2P20-201ENST00000520803 283 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 OR4A12P-201ENST00000530847 918 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MIR4509-3-201ENST00000578671 94 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MIR3944-201ENST00000581277 108 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPS4XP62701 MIR4444-1-201ENST00000581696 74 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MIR4509-2-201ENST00000583920 94 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MIR4444-2-201ENST00000584390 74 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.47□□□□□ -1.85
RPS4XP62701 AC069545.1-201ENST00000605671 358 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.47□□□□□ -1.85
RPS4XP62701 MIR4509-1-201ENST00000618224 94 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.47□□□□□ -1.85
RPS4XP62701 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
RPS4XP62701 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPS4XP62701 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPS4XP62701 Z99496.1-201ENST00000469424 1477 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 AC027287.1-201ENST00000553115 1453 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPS4XP62701 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.47□□□□□ -1.85
RPS4XP62701 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.47□□□□□ -1.85
RPS4XP62701 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPS4XP62701 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
RPS4XP62701 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
RPS4XP62701 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms