Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CKS1BP61024 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CKS1BP61024 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CKS1BP61024 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.32□□□□□ -2.04
CKS1BP61024 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.32□□□□□ -2.04
CKS1BP61024 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 RNU6-233P-201ENST00000410845 141 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 MTCO3P4-201ENST00000419236 787 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 SDCBPP2-201ENST00000424643 885 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.32□□□□□ -2.04
CKS1BP61024 YY1P1-201ENST00000427625 668 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.32□□□□□ -2.04
CKS1BP61024 AL133162.1-201ENST00000463228 453 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 MIR2276-201ENST00000516886 89 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 SCARNA14-201ENST00000516903 136 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 ERHP1-201ENST00000523006 310 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.32□□□□□ -2.04
CKS1BP61024 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.32□□□□□ -2.04
CKS1BP61024 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.32□□□□□ -2.04
CKS1BP61024 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 AC087499.8-201ENST00000578406 226 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.32□□□□□ -2.04
CKS1BP61024 NUTF2P8-201ENST00000604593 363 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 AL359535.1-201ENST00000612100 1087 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 MIR6875-201ENST00000617506 72 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.32□□□□□ -2.04
CKS1BP61024 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CKS1BP61024 MTND4P31-201ENST00000425607 1343 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.32□□□□□ -2.04
CKS1BP61024 MFSD8-233ENST00000641482 4860 ntBASIC2.32□□□□□ -2.04
CKS1BP61024 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
CKS1BP61024 AL672167.1-206ENST00000356293 943 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 AL049693.1-201ENST00000402760 611 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 SNORD88.1-201ENST00000408684 91 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 RPL32P35-201ENST00000415214 394 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 RPL21P32-201ENST00000419877 477 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AL645937.1-202ENST00000421799 937 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC091862.1-201ENST00000438016 1100 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC009961.3-201ENST00000449832 765 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.31□□□□□ -2.04
CKS1BP61024 UQCRHP3-201ENST00000451503 251 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.31□□□□□ -2.04
CKS1BP61024 UBDP1-202ENST00000457888 382 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.31□□□□□ -2.04
CKS1BP61024 RPL21P10-201ENST00000463521 490 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AP000852.1-201ENST00000472460 573 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 NDUFA5P9-201ENST00000472609 340 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC021205.2-201ENST00000480069 347 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AP002812.1-201ENST00000495378 474 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC026412.2-201ENST00000512270 1075 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 RNU6-352P-201ENST00000516908 107 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 SNORA31.20-201ENST00000517111 133 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC025881.1-201ENST00000518851 512 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 RANP9-201ENST00000519957 271 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.31□□□□□ -2.04
CKS1BP61024 AP006245.1-201ENST00000522549 120 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.31□□□□□ -2.04
CKS1BP61024 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.31□□□□□ -2.04
CKS1BP61024 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CKS1BP61024 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.31□□□□□ -2.04
CKS1BP61024 COX6CP3-201ENST00000580869 223 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC006116.10-201ENST00000591836 581 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC140725.3-201ENST00000616193 880 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 AP004607.9-201ENST00000618202 316 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CKS1BP61024 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 AC032011.1-201ENST00000611703 1549 ntBASIC2.31□□□□□ -2.04
CKS1BP61024 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
CKS1BP61024 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CKS1BP61024 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.31□□□□□ -2.04
CKS1BP61024 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CKS1BP61024 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
CKS1BP61024 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CKS1BP61024 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CKS1BP61024 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CKS1BP61024 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CKS1BP61024 FRG1CP-201ENST00000358464 769 ntBASIC2.3□□□□□ -2.04
CKS1BP61024 RNU1-70P-201ENST00000362618 164 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms