Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 AC012065.4-201ENST00000602445 679 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC004987.4-201ENST00000603383 338 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC087752.4-201ENST00000605911 462 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC010678.1-201ENST00000614118 713 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH12P55289 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 AC091953.3-201ENST00000623220 236 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC015908.5-201ENST00000623289 343 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC025048.6-202ENST00000627667 438 ntBASIC4.05□□□□□ -1.76
CDH12P55289 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH12P55289 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 KPNA2P2-201ENST00000419546 1489 ntBASIC4.05□□□□□ -1.76
CDH12P55289 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.04□□□□□ -1.76
CDH12P55289 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CDH12P55289 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CDH12P55289 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH12P55289 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDH12P55289 RNU6-1243P-201ENST00000364028 107 ntBASIC4.04□□□□□ -1.76
CDH12P55289 RNU6-777P-201ENST00000364265 104 ntBASIC4.04□□□□□ -1.76
CDH12P55289 Y_RNA.359-201ENST00000365498 102 ntBASIC4.04□□□□□ -1.76
CDH12P55289 RNU6-1226P-201ENST00000384317 107 ntBASIC4.04□□□□□ -1.76
CDH12P55289 RNY3P10-201ENST00000384764 102 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC016769.3-201ENST00000396562 315 ntBASIC4.04□□□□□ -1.76
CDH12P55289 DEFB108C-201ENST00000400154 252 ntBASIC4.04□□□□□ -1.76
CDH12P55289 DHFRP6-201ENST00000401776 268 ntBASIC4.04□□□□□ -1.76
CDH12P55289 LAP3P1-201ENST00000403648 294 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC083875.1-201ENST00000419509 405 ntBASIC4.04□□□□□ -1.76
CDH12P55289 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH12P55289 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH12P55289 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH12P55289 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 CEACAMP9-201ENST00000442990 513 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 ELOCP30-201ENST00000447108 299 ntBASIC4.04□□□□□ -1.76
CDH12P55289 EIF4A1P11-201ENST00000451239 222 ntBASIC4.04□□□□□ -1.76
CDH12P55289 RNU7-136P-201ENST00000458819 69 ntBASIC4.04□□□□□ -1.76
CDH12P55289 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH12P55289 AC010683.1-201ENST00000473673 378 ntBASIC4.04□□□□□ -1.76
CDH12P55289 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH12P55289 RN7SL826P-201ENST00000479724 288 ntBASIC4.04□□□□□ -1.76
CDH12P55289 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH12P55289 AC114981.1-201ENST00000503897 678 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH12P55289 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH12P55289 RNA5SP216-201ENST00000516111 123 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH12P55289 LSM6P2-201ENST00000552208 177 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AL391156.1-201ENST00000554965 554 ntBASIC4.04□□□□□ -1.76
CDH12P55289 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH12P55289 AC124068.1-201ENST00000563131 678 ntBASIC4.04□□□□□ -1.76
CDH12P55289 MAGOH2P-202ENST00000584384 429 ntBASIC4.04□□□□□ -1.76
CDH12P55289 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH12P55289 AC068790.6-201ENST00000602558 258 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC078795.2-201ENST00000602835 1252 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC068276.1-201ENST00000605793 379 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AL139286.2-201ENST00000606838 396 ntBASIC4.04□□□□□ -1.76
CDH12P55289 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.04□□□□□ -1.76
CDH12P55289 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AL121873.1-201ENST00000616013 524 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC068722.2-201ENST00000618734 544 ntBASIC4.04□□□□□ -1.76
CDH12P55289 MIR6891-201ENST00000618788 93 ntBASIC4.04□□□□□ -1.76
CDH12P55289 AC026585.1-201ENST00000619582 524 ntBASIC4.04□□□□□ -1.76
CDH12P55289 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDH12P55289 MTND5P28-201ENST00000438005 1594 ntBASIC4.04□□□□□ -1.76
CDH12P55289 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH12P55289 GDI2P1-201ENST00000429312 1336 ntBASIC4.03□□□□□ -1.76
CDH12P55289 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH12P55289 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH12P55289 AC103591.2-201ENST00000265259 766 ntBASIC4.03□□□□□ -1.76
CDH12P55289 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH12P55289 AC011155.1-201ENST00000316512 456 ntBASIC4.03□□□□□ -1.76
CDH12P55289 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDH12P55289 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH12P55289 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
CDH12P55289 SNORD113.2-201ENST00000364166 89 ntBASIC4.03□□□□□ -1.76
CDH12P55289 SNORA70F-201ENST00000384142 135 ntBASIC4.03□□□□□ -1.76
CDH12P55289 HMGB1P17-201ENST00000403495 628 ntBASIC4.03□□□□□ -1.76
CDH12P55289 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 Y_RNA.599-201ENST00000410489 109 ntBASIC4.03□□□□□ -1.76
CDH12P55289 SNRPFP1-201ENST00000414761 252 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH12P55289 AC004552.1-201ENST00000419089 348 ntBASIC4.03□□□□□ -1.76
CDH12P55289 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH12P55289 AL359265.2-201ENST00000434367 631 ntBASIC4.03□□□□□ -1.76
CDH12P55289 USP9YP28-201ENST00000435142 589 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms