Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC034229.4-201ENST00000607861 441 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.97□□□□□ -1.77
LHX1P48742 AC024257.5-201ENST00000612739 531 ntBASIC3.97□□□□□ -1.77
LHX1P48742 MIR4496-201ENST00000635896 61 ntBASIC3.97□□□□□ -1.77
LHX1P48742 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.97□□□□□ -1.77
LHX1P48742 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 OR11H5P-202ENST00000641612 1325 ntBASIC3.96□□□□□ -1.77
LHX1P48742 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
LHX1P48742 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.96□□□□□ -1.78
LHX1P48742 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LHX1P48742 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LHX1P48742 NACA3P-201ENST00000359690 648 ntBASIC3.96□□□□□ -1.78
LHX1P48742 RNU6-492P-201ENST00000363035 104 ntBASIC3.96□□□□□ -1.78
LHX1P48742 SNORA5A-201ENST00000384111 134 ntBASIC3.96□□□□□ -1.78
LHX1P48742 RNU6-413P-201ENST00000384115 107 ntBASIC3.96□□□□□ -1.78
LHX1P48742 RNU6-921P-201ENST00000384361 107 ntBASIC3.96□□□□□ -1.78
LHX1P48742 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LHX1P48742 AC073264.1-201ENST00000411508 416 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.96□□□□□ -1.78
LHX1P48742 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.96□□□□□ -1.78
LHX1P48742 AL513175.2-201ENST00000422071 443 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.96□□□□□ -1.78
LHX1P48742 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
LHX1P48742 Z77249.1-201ENST00000444622 1175 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AL034418.1-201ENST00000448675 860 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.96□□□□□ -1.78
LHX1P48742 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.96□□□□□ -1.78
LHX1P48742 PNPLA4P1-201ENST00000458328 305 ntBASIC3.96□□□□□ -1.78
LHX1P48742 TRBV12-2-201ENST00000489763 344 ntBASIC3.96□□□□□ -1.78
LHX1P48742 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.96□□□□□ -1.78
LHX1P48742 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.96□□□□□ -1.78
LHX1P48742 AP001189.2-201ENST00000527320 189 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.96□□□□□ -1.78
LHX1P48742 MTCYBP27-201ENST00000555160 670 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AP001180.3-201ENST00000582221 145 ntBASIC3.96□□□□□ -1.78
LHX1P48742 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.96□□□□□ -1.78
LHX1P48742 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.96□□□□□ -1.78
LHX1P48742 GAS5-AS1-201ENST00000602767 694 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AC026790.2-201ENST00000606282 430 ntBASIC3.96□□□□□ -1.78
LHX1P48742 AC016877.3-201ENST00000606778 504 ntBASIC3.96□□□□□ -1.78
LHX1P48742 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.96□□□□□ -1.78
LHX1P48742 AC026634.1-201ENST00000634369 198 ntBASIC3.96□□□□□ -1.78
LHX1P48742 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LHX1P48742 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.96□□□□□ -1.78
LHX1P48742 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LHX1P48742 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LHX1P48742 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LHX1P48742 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LHX1P48742 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.95□□□□□ -1.78
LHX1P48742 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.95□□□□□ -1.78
LHX1P48742 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
LHX1P48742 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 SNORD3H-201ENST00000384486 214 ntBASIC3.95□□□□□ -1.78
LHX1P48742 MIR649-201ENST00000384843 97 ntBASIC3.95□□□□□ -1.78
LHX1P48742 SOD2P1-201ENST00000396543 562 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AL356320.2-201ENST00000417263 507 ntBASIC3.95□□□□□ -1.78
LHX1P48742 MTCO3P1-205ENST00000422088 832 ntBASIC3.95□□□□□ -1.78
LHX1P48742 NANOGP6-201ENST00000429190 847 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.95□□□□□ -1.78
LHX1P48742 AC005345.1-201ENST00000431868 217 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.95□□□□□ -1.78
LHX1P48742 GOT2P5-201ENST00000433995 546 ntBASIC3.95□□□□□ -1.78
LHX1P48742 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.95□□□□□ -1.78
LHX1P48742 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 AC241584.1-201ENST00000438469 1241 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AL356535.1-201ENST00000440335 398 ntBASIC3.95□□□□□ -1.78
LHX1P48742 RPS3AP46-201ENST00000448352 682 ntBASIC3.95□□□□□ -1.78
LHX1P48742 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 DNAJC19P1-201ENST00000455312 319 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.95□□□□□ -1.78
LHX1P48742 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.95□□□□□ -1.78
LHX1P48742 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.95□□□□□ -1.78
LHX1P48742 GTF2IP8-201ENST00000560687 584 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AADACP1-206ENST00000561502 1193 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AC023813.2-201ENST00000564321 469 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AGGF1P5-201ENST00000567900 919 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.95□□□□□ -1.78
LHX1P48742 SNORD39.3-201ENST00000584451 71 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 MTND3P19-201ENST00000603825 345 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AL450336.1-201ENST00000605180 586 ntBASIC3.95□□□□□ -1.78
LHX1P48742 SNORA51-201ENST00000606420 132 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AC105429.2-201ENST00000610567 517 ntBASIC3.95□□□□□ -1.78
LHX1P48742 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.95□□□□□ -1.78
LHX1P48742 AC103858.2-201ENST00000621471 543 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms