Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC104763.3-201ENST00000613765 618 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 AL355365.1-201ENST00000616480 294 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 U73479.1-201ENST00000618062 168 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 AC068722.2-201ENST00000618734 544 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 AC022960.3-201ENST00000619794 441 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFRSF4P43489 AC099654.8-201ENST00000637757 681 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFRSF4P43489 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TNFRSF4P43489 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFRSF4P43489 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFRSF4P43489 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFRSF4P43489 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFRSF4P43489 SEPT7P7-201ENST00000420492 1301 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 OR11H5P-202ENST00000641612 1325 ntBASIC3.69□□□□□ -1.82
TNFRSF4P43489 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFRSF4P43489 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 ANKRD36P1-201ENST00000344424 659 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 RNU6-921P-201ENST00000384361 107 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 MIR649-201ENST00000384843 97 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 MIR490-201ENST00000384865 128 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 RPS24P12-201ENST00000402084 394 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC027644.1-201ENST00000419595 298 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 MTCYBP32-201ENST00000427945 1084 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC114973.1-201ENST00000429057 632 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 MTATP6P14-201ENST00000455189 673 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC099563.1-201ENST00000456086 418 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 TRBV12-2-201ENST00000489763 344 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 SUMO2P5-201ENST00000506790 245 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC005798.1-201ENST00000513715 387 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 SNORA74D-201ENST00000516404 141 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 OR4R3P-201ENST00000525084 838 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC092470.1-201ENST00000546187 132 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC087897.1-201ENST00000550134 156 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 NCAPGP2-201ENST00000557911 754 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AP005137.2-201ENST00000609238 400 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC093673.2-201ENST00000609674 331 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AL442067.2-201ENST00000614033 363 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 C2orf27A-204ENST00000623058 969 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC098679.5-201ENST00000624394 571 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AL445984.1-201ENST00000637834 659 ntBASIC3.68□□□□□ -1.82
TNFRSF4P43489 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFRSF4P43489 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TNFRSF4P43489 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 MAPK10-373ENST00000641983 6772 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 RNU6-839P-201ENST00000363347 108 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 MIR513A2-201ENST00000385249 127 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 MTCYBP24-201ENST00000420387 1106 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 RPS12P5-201ENST00000423449 371 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 PTGES3P1-201ENST00000439531 483 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms