Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.2□□□□□ -1.9
RFC3P40938 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.2□□□□□ -1.9
RFC3P40938 MIR7851-201ENST00000610611 160 ntBASIC3.2□□□□□ -1.9
RFC3P40938 AP003400.6-201ENST00000624698 740 ntBASIC3.2□□□□□ -1.9
RFC3P40938 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.2□□□□□ -1.9
RFC3P40938 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.2□□□□□ -1.9
RFC3P40938 SEC63P2-201ENST00000503863 1939 ntBASIC3.2□□□□□ -1.9
RFC3P40938 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RFC3P40938 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
RFC3P40938 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.2□□□□□ -1.9
RFC3P40938 AL645937.1-201ENST00000641739 1652 ntBASIC3.2□□□□□ -1.9
RFC3P40938 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RFC3P40938 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RFC3P40938 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
RFC3P40938 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 PABPC1P7-201ENST00000413177 1513 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AC091152.2-201ENST00000591628 2569 ntBASIC3.19□□□□□ -1.9
RFC3P40938 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 AC016716.1-201ENST00000265882 708 ntBASIC3.19□□□□□ -1.9
RFC3P40938 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RFC3P40938 RNU6-1243P-201ENST00000364028 107 ntBASIC3.19□□□□□ -1.9
RFC3P40938 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
RFC3P40938 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RFC3P40938 EIF5P1-201ENST00000400019 1231 ntBASIC3.19□□□□□ -1.9
RFC3P40938 RN7SKP53-201ENST00000411337 315 ntBASIC3.19□□□□□ -1.9
RFC3P40938 MTND4P22-201ENST00000413116 1169 ntBASIC3.19□□□□□ -1.9
RFC3P40938 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.19□□□□□ -1.9
RFC3P40938 RPS7P15-201ENST00000415804 584 ntBASIC3.19□□□□□ -1.9
RFC3P40938 KRR1P1-201ENST00000419430 803 ntBASIC3.19□□□□□ -1.9
RFC3P40938 OR1AA1P-201ENST00000419597 916 ntBASIC3.19□□□□□ -1.9
RFC3P40938 SDCBPP2-201ENST00000424643 885 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.19□□□□□ -1.9
RFC3P40938 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.19□□□□□ -1.9
RFC3P40938 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 YWHAZP8-201ENST00000436935 731 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AC004865.1-201ENST00000442276 1003 ntBASIC3.19□□□□□ -1.9
RFC3P40938 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.19□□□□□ -1.9
RFC3P40938 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.19□□□□□ -1.9
RFC3P40938 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AP003717.3-201ENST00000544832 1180 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AC011602.1-201ENST00000546484 331 ntBASIC3.19□□□□□ -1.9
RFC3P40938 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 MTCYBP28-201ENST00000566728 1132 ntBASIC3.19□□□□□ -1.9
RFC3P40938 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.19□□□□□ -1.9
RFC3P40938 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 AC091488.1-201ENST00000604239 660 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AL442067.2-201ENST00000614033 363 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AC092608.3-201ENST00000625017 386 ntBASIC3.19□□□□□ -1.9
RFC3P40938 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RFC3P40938 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFC3P40938 AC107081.3-201ENST00000612715 2034 ntBASIC3.19□□□□□ -1.9
RFC3P40938 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
RFC3P40938 AL592494.2-201ENST00000425455 1548 ntBASIC3.19□□□□□ -1.9
RFC3P40938 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
RFC3P40938 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
RFC3P40938 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 RNU6-1339P-201ENST00000363574 91 ntBASIC3.18□□□□□ -1.9
RFC3P40938 RNA5SP27-201ENST00000363839 119 ntBASIC3.18□□□□□ -1.9
RFC3P40938 RNU1-33P-201ENST00000364249 162 ntBASIC3.18□□□□□ -1.9
RFC3P40938 SNORA9-201ENST00000384215 133 ntBASIC3.18□□□□□ -1.9
RFC3P40938 MIR607-201ENST00000385241 96 ntBASIC3.18□□□□□ -1.9
RFC3P40938 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 DSTNP4-201ENST00000399472 474 ntBASIC3.18□□□□□ -1.9
RFC3P40938 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.18□□□□□ -1.9
RFC3P40938 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
RFC3P40938 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.18□□□□□ -1.9
RFC3P40938 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.18□□□□□ -1.9
RFC3P40938 RPL31P2-201ENST00000413849 377 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AL158156.1-201ENST00000422509 473 ntBASIC3.18□□□□□ -1.9
RFC3P40938 RPF2P1-201ENST00000424137 906 ntBASIC3.18□□□□□ -1.9
RFC3P40938 ETF1P3-201ENST00000430422 1160 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 AC006994.1-201ENST00000438212 839 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
RFC3P40938 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 MTND2P3-201ENST00000452458 470 ntBASIC3.18□□□□□ -1.9
RFC3P40938 RPS4XP22-201ENST00000480755 780 ntBASIC3.18□□□□□ -1.9
RFC3P40938 NCOR1P1-202ENST00000486162 291 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.18□□□□□ -1.9
RFC3P40938 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.18□□□□□ -1.9
RFC3P40938 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.18□□□□□ -1.9
RFC3P40938 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms