Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXD13P35453 AP001269.3-201ENST00000588718 329 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 HMGN2P28-201ENST00000606102 262 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC109809.1-201ENST00000619665 545 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 CYP3A51P-201ENST00000633513 256 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXD13P35453 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXD13P35453 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD13P35453 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXD13P35453 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD13P35453 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD13P35453 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 U1.1-201ENST00000384101 164 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXD13P35453 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 MTND2P5-201ENST00000432656 1006 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 snoU13.3-201ENST00000459441 104 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 PPIAP15-201ENST00000479662 484 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AC110792.1-201ENST00000491826 472 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD13P35453 RNU6-415P-201ENST00000516252 97 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD13P35453 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXD13P35453 AC125611.1-201ENST00000549563 229 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 RN7SL703P-201ENST00000578485 302 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AL592436.1-201ENST00000605135 558 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AP000240.1-201ENST00000609910 452 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AC091046.2-201ENST00000620775 665 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 AC068724.3-201ENST00000625906 87 ntBASIC4.26□□□□□ -1.73
HOXD13P35453 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD13P35453 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD13P35453 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXD13P35453 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXD13P35453 RNU6-1122P-201ENST00000384449 107 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 SOD2P1-201ENST00000396543 562 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC016769.3-201ENST00000396562 315 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD13P35453 HSFY1P1-201ENST00000423928 1178 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD13P35453 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD13P35453 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 ATP5HP2-201ENST00000433885 485 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC096638.2-201ENST00000434965 711 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 RPL23AP74-201ENST00000437246 471 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC092427.1-201ENST00000439177 601 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD13P35453 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD13P35453 RPS20P24-201ENST00000457473 361 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 SETP14-201ENST00000497538 873 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXD13P35453 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD13P35453 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXD13P35453 AP001636.2-201ENST00000525517 696 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXD13P35453 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXD13P35453 AC090695.1-201ENST00000561269 1222 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC120057.2-201ENST00000571520 271 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD13P35453 AC010928.3-201ENST00000587712 541 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXD13P35453 BNIP3P24-201ENST00000593398 557 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AC015726.1-201ENST00000602353 681 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 RPL23AP92-201ENST00000603609 255 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AL591424.2-201ENST00000617023 128 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 MIR6875-201ENST00000617506 72 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXD13P35453 AC120349.2-201ENST00000625002 298 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD13P35453 MTND2P41-201ENST00000637599 773 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 BDP1P-201ENST00000582658 1990 ntBASIC4.25□□□□□ -1.73
HOXD13P35453 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD13P35453 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD13P35453 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HOXD13P35453 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 NUP58P1-201ENST00000502546 1738 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HOXD13P35453 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HOXD13P35453 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 Y_RNA.465-201ENST00000384293 102 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 RNU6-821P-201ENST00000390995 107 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 SNRPEP2-201ENST00000397592 279 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms