Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CKS2P33552 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CKS2P33552 ASNSP3-201ENST00000451989 1306 ntBASIC2.17□□□□□ -2.06
CKS2P33552 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS2P33552 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS2P33552 RNU1-35P-201ENST00000362782 153 ntBASIC2.16□□□□□ -2.06
CKS2P33552 DEFB109C-201ENST00000382575 264 ntBASIC2.16□□□□□ -2.06
CKS2P33552 DEFB109B-201ENST00000382656 264 ntBASIC2.16□□□□□ -2.06
CKS2P33552 MIR181A2-201ENST00000384863 110 ntBASIC2.16□□□□□ -2.06
CKS2P33552 NUP35P2-201ENST00000416748 943 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AL445528.1-201ENST00000426330 420 ntBASIC2.16□□□□□ -2.06
CKS2P33552 OR51AB1P-201ENST00000429046 620 ntBASIC2.16□□□□□ -2.06
CKS2P33552 PSMA2P3-201ENST00000429685 675 ntBASIC2.16□□□□□ -2.06
CKS2P33552 RPL36AP6-201ENST00000435770 321 ntBASIC2.16□□□□□ -2.06
CKS2P33552 RPS29P6-201ENST00000438196 145 ntBASIC2.16□□□□□ -2.06
CKS2P33552 NOTCH2P1-201ENST00000443481 624 ntBASIC2.16□□□□□ -2.06
CKS2P33552 RPL21P23-201ENST00000446654 460 ntBASIC2.16□□□□□ -2.06
CKS2P33552 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS2P33552 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS2P33552 RPL31P53-201ENST00000457065 348 ntBASIC2.16□□□□□ -2.06
CKS2P33552 MTND3P6-201ENST00000485242 339 ntBASIC2.16□□□□□ -2.06
CKS2P33552 RPL21P13-201ENST00000488305 481 ntBASIC2.16□□□□□ -2.06
CKS2P33552 PRELID3BP6-201ENST00000503839 571 ntBASIC2.16□□□□□ -2.06
CKS2P33552 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS2P33552 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 AC113398.2-201ENST00000507630 558 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS2P33552 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 AC005351.1-201ENST00000511152 786 ntBASIC2.16□□□□□ -2.06
CKS2P33552 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.16□□□□□ -2.06
CKS2P33552 MTCO2P32-201ENST00000514865 403 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS2P33552 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS2P33552 AC104986.1-201ENST00000517978 436 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AP000857.1-201ENST00000532151 543 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS2P33552 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS2P33552 AC090115.4-201ENST00000609970 188 ntBASIC2.16□□□□□ -2.06
CKS2P33552 MIR6730-201ENST00000622213 67 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AC010435.1-201ENST00000623353 1177 ntBASIC2.16□□□□□ -2.06
CKS2P33552 AP000676.4-201ENST00000624659 623 ntBASIC2.16□□□□□ -2.06
CKS2P33552 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS2P33552 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 AC092447.7-201ENST00000422212 1621 ntBASIC2.16□□□□□ -2.06
CKS2P33552 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 AP002907.1-201ENST00000606361 1430 ntBASIC2.16□□□□□ -2.06
CKS2P33552 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CKS2P33552 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
CKS2P33552 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.15□□□□□ -2.06
CKS2P33552 AC080100.1-201ENST00000624239 5356 ntBASIC2.15□□□□□ -2.07
CKS2P33552 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CKS2P33552 RNU6-629P-201ENST00000384061 103 ntBASIC2.15□□□□□ -2.07
CKS2P33552 SNORD67-201ENST00000390833 111 ntBASIC2.15□□□□□ -2.07
CKS2P33552 EIF5P1-201ENST00000400019 1231 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AL049693.1-201ENST00000402760 611 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.15□□□□□ -2.07
CKS2P33552 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.15□□□□□ -2.07
CKS2P33552 HSFY4P-201ENST00000415994 1181 ntBASIC2.15□□□□□ -2.07
CKS2P33552 RFESDP1-201ENST00000422350 461 ntBASIC2.15□□□□□ -2.07
CKS2P33552 USP9YP36-201ENST00000424581 829 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.15□□□□□ -2.07
CKS2P33552 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CKS2P33552 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.15□□□□□ -2.07
CKS2P33552 RPL9P33-201ENST00000484311 566 ntBASIC2.15□□□□□ -2.07
CKS2P33552 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS2P33552 AC110794.1-201ENST00000505816 425 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.15□□□□□ -2.07
CKS2P33552 SNORA9.3-201ENST00000516383 129 ntBASIC2.15□□□□□ -2.07
CKS2P33552 RNU6-1004P-201ENST00000516584 111 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.15□□□□□ -2.07
CKS2P33552 BNIP3P5-201ENST00000562290 498 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS2P33552 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CKS2P33552 AC009464.1-201ENST00000615731 469 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC007318.2-201ENST00000620999 243 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC244258.1-201ENST00000637553 1071 ntBASIC2.15□□□□□ -2.07
CKS2P33552 AC009093.8-201ENST00000641769 292 ntBASIC2.15□□□□□ -2.07
CKS2P33552 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.15□□□□□ -2.07
CKS2P33552 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.15□□□□□ -2.07
CKS2P33552 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CKS2P33552 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
CKS2P33552 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.14□□□□□ -2.07
CKS2P33552 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CKS2P33552 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.14□□□□□ -2.07
CKS2P33552 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKS2P33552 RNU6-1293P-201ENST00000384077 107 ntBASIC2.14□□□□□ -2.07
CKS2P33552 MIR512-1-201ENST00000384913 84 ntBASIC2.14□□□□□ -2.07
CKS2P33552 AL357075.1-201ENST00000404107 726 ntBASIC2.14□□□□□ -2.07
CKS2P33552 AL591034.1-201ENST00000407447 340 ntBASIC2.14□□□□□ -2.07
CKS2P33552 U3.42-201ENST00000408746 214 ntBASIC2.14□□□□□ -2.07
CKS2P33552 RNU6-1077P-201ENST00000410506 102 ntBASIC2.14□□□□□ -2.07
CKS2P33552 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.14□□□□□ -2.07
CKS2P33552 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.14□□□□□ -2.07
CKS2P33552 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.14□□□□□ -2.07
CKS2P33552 BUD31P2-201ENST00000449374 300 ntBASIC2.14□□□□□ -2.07
CKS2P33552 AL136126.1-201ENST00000473603 402 ntBASIC2.14□□□□□ -2.07
CKS2P33552 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms