Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CCNG2P1-201ENST00000549521 1000 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC136624.4-201ENST00000573044 370 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AP005119.2-201ENST00000579735 1105 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 MIR5096-201ENST00000583713 70 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC097468.3-201ENST00000607956 456 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AL359535.1-201ENST00000612100 1087 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC091834.1-201ENST00000614543 472 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AP001506.1-201ENST00000615444 211 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC6A4P31645 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC6A4P31645 MAPK10-320ENST00000641462 6696 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC6A4P31645 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 NEAT1-202ENST00000501122 22743 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC6A4P31645 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC6A4P31645 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SLC6A4P31645 GDI2P1-201ENST00000429312 1336 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 AC108467.2-201ENST00000617640 1597 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
SLC6A4P31645 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 AL359922.3-201ENST00000624779 1670 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC6A4P31645 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 SNORA70.2-201ENST00000364506 135 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC6A4P31645 Z98745.1-201ENST00000402553 494 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 Y_RNA.604-201ENST00000410574 102 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 RPL7P36-201ENST00000444633 681 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 MTND4P18-201ENST00000447010 465 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC098824.1-201ENST00000453565 980 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 RPL7P22-201ENST00000466005 733 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 AL358832.1-201ENST00000497800 389 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC6A4P31645 RFPL4AP5-201ENST00000514977 504 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 MTND4LP18-201ENST00000526864 291 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 EEF1B2P4-201ENST00000551398 348 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 AL133241.1-201ENST00000556832 487 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC6A4P31645 MIR5697-201ENST00000578045 78 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC069061.3-201ENST00000582254 823 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 MIR4307-201ENST00000582802 84 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC008782.1-201ENST00000603386 430 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC112191.3-201ENST00000604371 277 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC090578.1-201ENST00000604955 591 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AL159169.3-201ENST00000608871 561 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC091304.9-201ENST00000612091 226 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 AC009704.2-201ENST00000618739 483 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 U6.101-201ENST00000637707 76 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC6A4P31645 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.74□□□□□ -1.65
SLC6A4P31645 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC6A4P31645 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC6A4P31645 AC005332.5-201ENST00000591222 2919 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC6A4P31645 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC6A4P31645 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC6A4P31645 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC6A4P31645 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC6A4P31645 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC6A4P31645 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
SLC6A4P31645 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
SLC6A4P31645 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 MIR181A1-201ENST00000385026 110 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 AL359643.1-201ENST00000404109 423 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 RNU6-603P-201ENST00000411403 107 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC6A4P31645 HMGB3P23-201ENST00000414981 585 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 AC009480.2-201ENST00000422916 432 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 AL513174.1-201ENST00000423182 629 ntBASIC4.73□□□□□ -1.65
SLC6A4P31645 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms