Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ABCD3P28288 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ABCD3P28288 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ABCD3P28288 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 AC006971.1-201ENST00000407916 4486 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.11□□□□□ -1.75
ABCD3P28288 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ABCD3P28288 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ABCD3P28288 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 AC087190.4-201ENST00000574616 8334 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ABCD3P28288 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ABCD3P28288 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
ABCD3P28288 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ABCD3P28288 RNA5SP88-201ENST00000365560 109 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.11□□□□□ -1.75
ABCD3P28288 CEACAMP8-201ENST00000413902 580 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 AC245052.5-201ENST00000416320 649 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.11□□□□□ -1.75
ABCD3P28288 MTCO3P12-201ENST00000416718 547 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC009480.2-201ENST00000422916 432 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.11□□□□□ -1.75
ABCD3P28288 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.11□□□□□ -1.75
ABCD3P28288 RPL21P112-201ENST00000434403 463 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.11□□□□□ -1.75
ABCD3P28288 ART2BP-201ENST00000453501 499 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC053481.1-201ENST00000467217 306 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC090013.1-201ENST00000485147 480 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC108022.1-201ENST00000493466 478 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC023424.2-201ENST00000493479 777 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.11□□□□□ -1.75
ABCD3P28288 AC005921.1-201ENST00000510589 286 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.11□□□□□ -1.75
ABCD3P28288 MTCYBP41-201ENST00000528913 1123 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.11□□□□□ -1.75
ABCD3P28288 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.11□□□□□ -1.75
ABCD3P28288 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 AL353997.4-201ENST00000586196 166 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 RPL7P50-201ENST00000600588 727 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC025811.1-201ENST00000604312 472 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC090186.1-201ENST00000605991 572 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AP002360.3-201ENST00000607673 710 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 MIR6748-201ENST00000610433 71 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC015813.4-201ENST00000610469 179 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 VIS1.1-201ENST00000610517 203 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC018755.4-201ENST00000619715 454 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AL031667.3-201ENST00000620124 655 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 AC067931.1-201ENST00000624190 671 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.11□□□□□ -1.75
ABCD3P28288 CRYM-AS1-204ENST00000637983 556 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 OR11H5P-202ENST00000641612 1325 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 MFSD8-242ENST00000641690 4199 ntBASIC4.11□□□□□ -1.75
ABCD3P28288 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ABCD3P28288 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.11□□□□□ -1.75
ABCD3P28288 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ABCD3P28288 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ABCD3P28288 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ABCD3P28288 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ABCD3P28288 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.1□□□□□ -1.75
ABCD3P28288 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.1□□□□□ -1.75
ABCD3P28288 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ABCD3P28288 AL161781.1-201ENST00000354277 403 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 MIR448-201ENST00000362131 111 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 RNA5SP447-201ENST00000363749 119 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 RNU1-32P-201ENST00000363937 159 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 RNA5SP189-201ENST00000364920 115 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.1□□□□□ -1.75
ABCD3P28288 RNU6-723P-201ENST00000383973 107 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 ELOCP19-201ENST00000411919 318 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ABCD3P28288 SNRPFP1-201ENST00000414761 252 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 RPL23AP39-201ENST00000415533 405 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 TMSB10P2-201ENST00000416049 131 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 AC099677.1-201ENST00000420575 175 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ABCD3P28288 AC011233.1-201ENST00000422812 283 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 MTND4LP10-201ENST00000435146 291 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.1□□□□□ -1.75
ABCD3P28288 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.1□□□□□ -1.75
ABCD3P28288 AC002381.1-201ENST00000447049 280 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.1□□□□□ -1.75
ABCD3P28288 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.1□□□□□ -1.75
ABCD3P28288 RPL7P52-201ENST00000449200 742 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ABCD3P28288 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ABCD3P28288 AC013356.1-201ENST00000489027 564 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 HSPE1P23-201ENST00000509838 286 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 AC093677.1-201ENST00000514414 678 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 IGLVIV-65-201ENST00000517313 360 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 AC008802.1-201ENST00000519121 791 ntBASIC4.1□□□□□ -1.75
ABCD3P28288 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.1□□□□□ -1.75
ABCD3P28288 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms