Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 AC139713.2-215ENST00000641428 5037 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 Y_RNA.77-201ENST00000362962 107 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RNU6-1066P-201ENST00000363573 105 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RNU4-24P-201ENST00000364565 139 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 RPS3AP26-201ENST00000398259 784 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AL078604.1-201ENST00000404609 466 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RNU2-65P-201ENST00000410162 185 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RNU6-272P-201ENST00000411028 104 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RN7SKP167-201ENST00000411047 285 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 AC234782.4-201ENST00000417646 1048 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RPP40P1-201ENST00000426762 456 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNA3P22001 RPS27AP15-201ENST00000447672 466 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RPL7P59-201ENST00000447700 943 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RPL12P26-201ENST00000452430 487 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 RPL37P3-201ENST00000456825 293 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNA3P22001 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNA3P22001 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 AC147055.4-201ENST00000504399 745 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.98□□□□□ -1.61
KCNA3P22001 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.98□□□□□ -1.61
KCNA3P22001 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 AC027807.1-201ENST00000559921 996 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 MIR3915-201ENST00000578518 97 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNA3P22001 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNA3P22001 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.98□□□□□ -1.61
KCNA3P22001 U3.45-201ENST00000607547 219 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AC073348.1-201ENST00000623002 331 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AC007494.3-201ENST00000624660 743 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AC091965.5-201ENST00000624785 342 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNA3P22001 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNA3P22001 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNA3P22001 ERCC6-202ENST00000374127 1782 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNA3P22001 PRO1804-201ENST00000623780 2050 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNA3P22001 AC022031.1-201ENST00000585985 2593 ntBASIC4.98□□□□□ -1.61
KCNA3P22001 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNA3P22001 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KCNA3P22001 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNA3P22001 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNA3P22001 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
KCNA3P22001 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNA3P22001 AL512646.1-201ENST00000269395 1077 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 Y_RNA.51-201ENST00000362725 102 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 RNU6-623P-201ENST00000363143 105 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 RNU5D-1-201ENST00000363299 116 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 Y_RNA.408-201ENST00000383987 102 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 U1.1-201ENST00000384101 164 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNA3P22001 AL133264.1-201ENST00000407157 562 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNA3P22001 AL035423.1-201ENST00000420331 213 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNA3P22001 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNA3P22001 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNA3P22001 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNA3P22001 FTH1P25-201ENST00000447665 469 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AL133162.1-201ENST00000463228 453 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC108751.2-201ENST00000469993 231 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC005912.1-201ENST00000495392 255 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC092045.1-201ENST00000495716 1231 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 HSPD1P15-201ENST00000505573 1122 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC104619.4-201ENST00000510773 249 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 RNU6-678P-201ENST00000516832 109 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 RNA5SP179-201ENST00000517284 121 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNA3P22001 HIGD1AP6-201ENST00000521833 279 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AP001189.2-201ENST00000527320 189 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNA3P22001 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNA3P22001 AC091516.1-201ENST00000549191 703 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC023161.2-201ENST00000551218 780 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC024909.2-201ENST00000553035 286 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
KCNA3P22001 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.97□□□□□ -1.61
KCNA3P22001 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.97□□□□□ -1.61
KCNA3P22001 AC025165.5-201ENST00000602802 578 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC091167.4-201ENST00000605079 184 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 IMMP1LP1-201ENST00000605170 488 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.97□□□□□ -1.61
KCNA3P22001 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.97□□□□□ -1.61
KCNA3P22001 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KCNA3P22001 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNA3P22001 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms