Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 RPS15AP6-201ENST00000420703 385 ntBASIC3.31□□□□□ -1.88
NCK1P16333 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC246680.2-201ENST00000422106 389 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 OR8F1P-201ENST00000425243 930 ntBASIC3.31□□□□□ -1.88
NCK1P16333 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.31□□□□□ -1.88
NCK1P16333 AL117339.2-201ENST00000430475 180 ntBASIC3.31□□□□□ -1.88
NCK1P16333 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.31□□□□□ -1.88
NCK1P16333 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.31□□□□□ -1.88
NCK1P16333 AL592437.1-201ENST00000443781 492 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.31□□□□□ -1.88
NCK1P16333 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.31□□□□□ -1.88
NCK1P16333 AC104073.1-201ENST00000451988 151 ntBASIC3.31□□□□□ -1.88
NCK1P16333 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AL136097.1-201ENST00000456945 913 ntBASIC3.31□□□□□ -1.88
NCK1P16333 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.31□□□□□ -1.88
NCK1P16333 RPL7L1P8-201ENST00000469911 741 ntBASIC3.31□□□□□ -1.88
NCK1P16333 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.31□□□□□ -1.88
NCK1P16333 PRELID3BP5-201ENST00000508612 460 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.31□□□□□ -1.88
NCK1P16333 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.31□□□□□ -1.88
NCK1P16333 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
NCK1P16333 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
NCK1P16333 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.31□□□□□ -1.88
NCK1P16333 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.31□□□□□ -1.88
NCK1P16333 AP001636.2-201ENST00000525517 696 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC113192.3-201ENST00000529152 742 ntBASIC3.31□□□□□ -1.88
NCK1P16333 LSM6P2-201ENST00000552208 177 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.31□□□□□ -1.88
NCK1P16333 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.31□□□□□ -1.88
NCK1P16333 MIR4666A-201ENST00000580160 79 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 AC022146.1-201ENST00000595307 847 ntBASIC3.31□□□□□ -1.88
NCK1P16333 AC013468.1-201ENST00000608680 598 ntBASIC3.31□□□□□ -1.88
NCK1P16333 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.31□□□□□ -1.88
NCK1P16333 U6.98-201ENST00000637157 84 ntBASIC3.31□□□□□ -1.88
NCK1P16333 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCK1P16333 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCK1P16333 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCK1P16333 AL365440.1-201ENST00000436135 2167 ntBASIC3.31□□□□□ -1.88
NCK1P16333 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 RNU6-600P-201ENST00000362524 99 ntBASIC3.3□□□□□ -1.88
NCK1P16333 RNU1-85P-201ENST00000364127 164 ntBASIC3.3□□□□□ -1.88
NCK1P16333 RNU6-468P-201ENST00000384003 109 ntBASIC3.3□□□□□ -1.88
NCK1P16333 RN7SKP53-201ENST00000411337 315 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AL133384.1-201ENST00000412744 351 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.3□□□□□ -1.88
NCK1P16333 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.3□□□□□ -1.88
NCK1P16333 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.3□□□□□ -1.88
NCK1P16333 AC007967.1-201ENST00000455422 1159 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.3□□□□□ -1.88
NCK1P16333 TRBV26-201ENST00000456572 344 ntBASIC3.3□□□□□ -1.88
NCK1P16333 HMGN2P16-201ENST00000456802 261 ntBASIC3.3□□□□□ -1.88
NCK1P16333 FTH1P2-201ENST00000466086 412 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AL024509.2-201ENST00000493462 493 ntBASIC3.3□□□□□ -1.88
NCK1P16333 SETP14-201ENST00000497538 873 ntBASIC3.3□□□□□ -1.88
NCK1P16333 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.3□□□□□ -1.88
NCK1P16333 HPRT1P1-201ENST00000509498 657 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC108064.1-201ENST00000513791 460 ntBASIC3.3□□□□□ -1.88
NCK1P16333 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.3□□□□□ -1.88
NCK1P16333 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.3□□□□□ -1.88
NCK1P16333 FABP5P12-201ENST00000515543 389 ntBASIC3.3□□□□□ -1.88
NCK1P16333 RNA5SP135-201ENST00000517019 125 ntBASIC3.3□□□□□ -1.88
NCK1P16333 C1GALT1P3-201ENST00000522049 819 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.3□□□□□ -1.88
NCK1P16333 AP000790.1-201ENST00000528891 737 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
NCK1P16333 CYCSP30-201ENST00000546447 172 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AL136520.1-202ENST00000555494 763 ntBASIC3.3□□□□□ -1.88
NCK1P16333 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 AC098483.2-201ENST00000603158 454 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC002487.1-201ENST00000604565 994 ntBASIC3.3□□□□□ -1.88
NCK1P16333 HSPE1P14-201ENST00000605812 302 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC026741.1-201ENST00000605892 482 ntBASIC3.3□□□□□ -1.88
NCK1P16333 VIS1.1-201ENST00000610517 203 ntBASIC3.3□□□□□ -1.88
NCK1P16333 AC005344.1-201ENST00000613391 459 ntBASIC3.3□□□□□ -1.88
NCK1P16333 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NCK1P16333 AL121594.5-201ENST00000631724 573 ntBASIC3.3□□□□□ -1.88
NCK1P16333 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NCK1P16333 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.3□□□□□ -1.88
NCK1P16333 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCK1P16333 AC130650.2-201ENST00000618736 2403 ntBASIC3.3□□□□□ -1.88
NCK1P16333 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms