Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NIFKP8-201ENST00000560500 874 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 NPM1P47-201ENST00000560843 856 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AC090616.2-202ENST00000584248 222 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC125494.3-201ENST00000602759 455 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 Z69908.1-201ENST00000622603 247 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AC109454.4-201ENST00000623411 649 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 MFSD8-245ENST00000641743 948 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 AL450326.2-201ENST00000421913 1962 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HOXC6P09630 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.4□□□□□ -1.7
HOXC6P09630 AC107027.3-201ENST00000565095 3473 ntBASIC4.4□□□□□ -1.7
HOXC6P09630 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC6P09630 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HOXC6P09630 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HOXC6P09630 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC6P09630 RNU6-666P-201ENST00000363499 107 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 RNU6-553P-201ENST00000364047 96 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 RNU4-75P-201ENST00000364621 146 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 RNU6-185P-201ENST00000384421 107 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HOXC6P09630 AL590084.2-201ENST00000401481 382 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AL034374.1-201ENST00000406329 351 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC6P09630 OR5AW1P-201ENST00000426334 1006 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC6P09630 ATP5F1P1-201ENST00000433775 569 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 Z74696.2-201ENST00000436514 498 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 AL360221.1-201ENST00000445989 335 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 DNAJC19P8-201ENST00000452887 259 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 MRPL42P4-201ENST00000453267 443 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 MTCO3P16-201ENST00000454456 754 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC007967.1-201ENST00000455422 1159 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AL109741.2-201ENST00000455561 343 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC6P09630 AC104108.1-201ENST00000509930 412 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC6P09630 AC104619.4-201ENST00000510773 249 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HOXC6P09630 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC6P09630 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 AC093755.1-201ENST00000512950 1023 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AL117351.2-201ENST00000513571 157 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC023632.1-201ENST00000518463 375 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 OR5M7P-201ENST00000526140 972 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 AC007115.1-201ENST00000546853 234 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC6P09630 MIR3915-201ENST00000578518 97 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC6P09630 MIR3922-201ENST00000585192 84 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 AP001981.2-201ENST00000603241 418 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 RNU1-30P-201ENST00000606575 163 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC103591.3-201ENST00000608684 209 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 STMN1P1-201ENST00000617809 440 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC6P09630 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC6P09630 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC6P09630 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HOXC6P09630 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC6P09630 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
HOXC6P09630 MARK2P15-201ENST00000432204 2186 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC6P09630 HSPA8P17-201ENST00000427029 1382 ntBASIC4.4□□□□□ -1.71
HOXC6P09630 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC6P09630 GTF2H2B-203ENST00000508065 1432 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC6P09630 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC6P09630 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC6P09630 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC6P09630 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXC6P09630 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXC6P09630 RNU6-707P-201ENST00000364647 95 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC6P09630 OR1L1-202ENST00000373686 1083 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 Y_RNA.505-201ENST00000384489 102 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC6P09630 Y_RNA.599-201ENST00000410489 109 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC6P09630 AC114814.2-201ENST00000419195 485 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 OR6K4P-201ENST00000423179 955 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 AC022022.1-201ENST00000430304 178 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 AL159987.2-201ENST00000432754 307 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 AL354941.1-201ENST00000438600 464 ntBASIC4.39□□□□□ -1.71
HOXC6P09630 MTND3P1-201ENST00000441336 220 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms