Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQB2P05538 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQB2P05538 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQB2P05538 AC107294.3-201ENST00000609211 526 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 MIR7973-1-201ENST00000614683 76 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 XIST_intron.1-201ENST00000619444 68 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQB2P05538 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 ZNF826P-207ENST00000622273 1910 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL353743.1-202ENST00000431724 1695 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 Y_RNA.333-201ENST00000365274 102 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL138885.1-201ENST00000405921 675 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 RNU2-37P-201ENST00000410695 177 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 RPL26P37-201ENST00000411983 438 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL024507.1-201ENST00000412741 274 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 DUTP6-201ENST00000425573 462 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 NDUFA5P10-201ENST00000432147 357 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 MTCYBP31-201ENST00000438855 1122 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL162389.1-201ENST00000449233 177 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 HMGB3P30-201ENST00000457863 606 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 RPL27AP5-201ENST00000469428 449 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AP002404.1-201ENST00000532005 451 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL121594.4-201ENST00000556211 1196 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 HMGB1P51-201ENST00000605166 638 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AC011472.4-201ENST00000615848 491 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 CR392039.4-201ENST00000624968 501 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQB2P05538 AC092326.2-201ENST00000624772 1561 ntBASIC2.99□□□□□ -1.93
HLA-DQB2P05538 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC007563.3-201ENST00000433233 371 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 RSL24D1P3-201ENST00000449255 495 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 MTND2P8-201ENST00000450555 1025 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 RPL7P23-201ENST00000493874 747 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 RNU6-1004P-201ENST00000516584 111 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 TRAV37-201ENST00000553906 342 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 MIR4325-201ENST00000583049 90 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC007566.2-201ENST00000603642 413 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC099778.2-201ENST00000610904 211 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AL162274.2-201ENST00000614406 332 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 AC015726.3-201ENST00000624501 418 ntBASIC2.98□□□□□ -1.93
HLA-DQB2P05538 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DQB2P05538 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 RNU6-31P-201ENST00000384388 108 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 GSTA12P-201ENST00000402398 508 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 SNORA11C-201ENST00000408532 129 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 RPS24P8-201ENST00000431490 402 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 NEK4P1-201ENST00000433383 879 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 ARL5AP3-201ENST00000439327 386 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 MTCYBP12-201ENST00000440559 1134 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 TPMTP4-201ENST00000450749 678 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 RN7SKP82-201ENST00000516786 223 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 SNORA70.24-201ENST00000517233 118 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 OR5D17P-201ENST00000531492 978 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 AL161756.2-201ENST00000604597 246 ntBASIC2.97□□□□□ -1.93
HLA-DQB2P05538 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms