Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AP005229.2-201ENST00000609980 697 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL2A1P02458 AC068792.1-201ENST00000621354 417 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AL359715.5-201ENST00000623431 443 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC092608.3-201ENST00000625017 386 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC244205.2-202ENST00000635781 342 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL2A1P02458 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 AC011503.2-201ENST00000594230 1500 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC017071.1-201ENST00000564407 2204 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL2A1P02458 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL2A1P02458 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
COL2A1P02458 FTLP6-201ENST00000355274 422 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 RNU6-792P-201ENST00000363490 107 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 RNU6-609P-201ENST00000365459 107 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 MIR421-201ENST00000365696 85 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 NACAP7-201ENST00000407371 609 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.93□□□□□ -1.78
COL2A1P02458 AC063979.1-201ENST00000415539 377 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AC013268.2-201ENST00000420753 337 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 MTND4P24-201ENST00000424002 397 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.93□□□□□ -1.78
COL2A1P02458 RPL23AP82-202ENST00000427528 469 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL2A1P02458 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.93□□□□□ -1.78
COL2A1P02458 HMGB1P16-201ENST00000447155 540 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL2A1P02458 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.93□□□□□ -1.78
COL2A1P02458 CENPBD1P1-201ENST00000464061 469 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 ACTG1P13-201ENST00000486987 1043 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 HMGB1P38-201ENST00000490557 577 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.93□□□□□ -1.78
COL2A1P02458 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.93□□□□□ -1.78
COL2A1P02458 AC004024.1-201ENST00000549244 247 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AL121576.1-201ENST00000556055 276 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AL022067.1-201ENST00000602426 454 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AC021171.1-201ENST00000603137 706 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 MIR8084-201ENST00000614105 89 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 AC078880.5-201ENST00000617845 421 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.93□□□□□ -1.78
COL2A1P02458 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.93□□□□□ -1.78
COL2A1P02458 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL2A1P02458 AL513302.2-201ENST00000562313 1842 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL2A1P02458 AC000123.3-201ENST00000624029 4975 ntBASIC3.93□□□□□ -1.78
COL2A1P02458 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
COL2A1P02458 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL2A1P02458 RNU1-70P-201ENST00000362618 164 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 BX664727.1-201ENST00000416024 466 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC012065.2-201ENST00000421295 375 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 FO393414.1-201ENST00000428697 1184 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 MTND2P21-201ENST00000436242 1042 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 MED6P1-201ENST00000439659 713 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AL513321.1-201ENST00000441175 761 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.92□□□□□ -1.78
COL2A1P02458 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC021678.1-201ENST00000505195 936 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 RNA5SP341-201ENST00000516261 117 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.92□□□□□ -1.78
COL2A1P02458 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 HIGD1AP1-201ENST00000550979 275 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 MTND3P13-201ENST00000574391 343 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AP000919.1-202ENST00000581139 1264 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AP000676.3-201ENST00000623299 569 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AC017037.3-201ENST00000625016 472 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 MIR3974-201ENST00000637126 96 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL2A1P02458 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL2A1P02458 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL2A1P02458 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.92□□□□□ -1.78
COL2A1P02458 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL2A1P02458 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL2A1P02458 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL2A1P02458 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL2A1P02458 MIR16-2-201ENST00000362117 81 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 RNU5E-10P-201ENST00000363506 118 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms