Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.04□□□□□ -1.76
LDLRP01130 XPOTP1-201ENST00000443317 2398 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC107081.3-201ENST00000612715 2034 ntBASIC4.04□□□□□ -1.76
LDLRP01130 MIR372-201ENST00000362225 67 ntBASIC4.04□□□□□ -1.76
LDLRP01130 Y_RNA.192-201ENST00000363977 102 ntBASIC4.04□□□□□ -1.76
LDLRP01130 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
LDLRP01130 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRP01130 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LDLRP01130 PTMAP2-201ENST00000397627 327 ntBASIC4.04□□□□□ -1.76
LDLRP01130 DSTNP4-201ENST00000399472 474 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AL138880.1-201ENST00000405824 642 ntBASIC4.04□□□□□ -1.76
LDLRP01130 RPL23AP47-201ENST00000408017 460 ntBASIC4.04□□□□□ -1.76
LDLRP01130 SNORA3C-201ENST00000408792 125 ntBASIC4.04□□□□□ -1.76
LDLRP01130 Y_RNA.599-201ENST00000410489 109 ntBASIC4.04□□□□□ -1.76
LDLRP01130 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.04□□□□□ -1.76
LDLRP01130 FCF1P2-201ENST00000415284 583 ntBASIC4.04□□□□□ -1.76
LDLRP01130 BOLA3P4-201ENST00000418151 400 ntBASIC4.04□□□□□ -1.76
LDLRP01130 RPL7P44-201ENST00000424827 742 ntBASIC4.04□□□□□ -1.76
LDLRP01130 RPL36P19-201ENST00000430744 301 ntBASIC4.04□□□□□ -1.76
LDLRP01130 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.04□□□□□ -1.76
LDLRP01130 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
LDLRP01130 CEACAMP1-201ENST00000434624 1035 ntBASIC4.04□□□□□ -1.76
LDLRP01130 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.04□□□□□ -1.76
LDLRP01130 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.04□□□□□ -1.76
LDLRP01130 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.04□□□□□ -1.76
LDLRP01130 AC073387.1-201ENST00000453261 709 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.04□□□□□ -1.76
LDLRP01130 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.04□□□□□ -1.76
LDLRP01130 AL133477.1-201ENST00000457472 514 ntBASIC4.04□□□□□ -1.76
LDLRP01130 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.04□□□□□ -1.76
LDLRP01130 AL132838.2-201ENST00000492041 314 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.04□□□□□ -1.76
LDLRP01130 MTATP6P22-201ENST00000507369 598 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC108475.1-201ENST00000507880 950 ntBASIC4.04□□□□□ -1.76
LDLRP01130 SOD1P3-201ENST00000518682 454 ntBASIC4.04□□□□□ -1.76
LDLRP01130 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.04□□□□□ -1.76
LDLRP01130 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.04□□□□□ -1.76
LDLRP01130 AC107016.1-201ENST00000550463 337 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC007424.1-203ENST00000554613 687 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC022069.1-201ENST00000582910 658 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.04□□□□□ -1.76
LDLRP01130 AL158042.1-201ENST00000605338 460 ntBASIC4.04□□□□□ -1.76
LDLRP01130 HSPE1P14-201ENST00000605812 302 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AC087752.4-201ENST00000605911 462 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AP000255.1-201ENST00000610276 676 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AL359715.5-201ENST00000623431 443 ntBASIC4.04□□□□□ -1.76
LDLRP01130 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
LDLRP01130 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRP01130 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.04□□□□□ -1.76
LDLRP01130 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRP01130 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.04□□□□□ -1.76
LDLRP01130 SAGE2P-201ENST00000420011 2126 ntBASIC4.04□□□□□ -1.76
LDLRP01130 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LDLRP01130 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRP01130 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRP01130 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRP01130 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 MFSD8-242ENST00000641690 4199 ntBASIC4.03□□□□□ -1.76
LDLRP01130 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRP01130 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 AC109315.1-201ENST00000584143 1347 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRP01130 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRP01130 OR5P1P-201ENST00000299512 925 ntBASIC4.03□□□□□ -1.76
LDLRP01130 RNU6-560P-201ENST00000364007 108 ntBASIC4.03□□□□□ -1.76
LDLRP01130 RNU6-115P-201ENST00000364310 107 ntBASIC4.03□□□□□ -1.76
LDLRP01130 Y_RNA.333-201ENST00000365274 102 ntBASIC4.03□□□□□ -1.76
LDLRP01130 Y_RNA.408-201ENST00000383987 102 ntBASIC4.03□□□□□ -1.76
LDLRP01130 RNU6-444P-201ENST00000383988 108 ntBASIC4.03□□□□□ -1.76
LDLRP01130 RNU6-83P-201ENST00000384568 112 ntBASIC4.03□□□□□ -1.76
LDLRP01130 CYCSP19-201ENST00000411715 316 ntBASIC4.03□□□□□ -1.76
LDLRP01130 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AC009237.2-201ENST00000421358 284 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 MTCO3P30-201ENST00000426425 670 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AL513175.1-201ENST00000431492 780 ntBASIC4.03□□□□□ -1.76
LDLRP01130 ATP5F1P1-201ENST00000433775 569 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AC023347.2-201ENST00000433994 462 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 RPL23AP83-201ENST00000434984 473 ntBASIC4.03□□□□□ -1.76
LDLRP01130 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AC114495.1-201ENST00000441274 436 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRP01130 MTCO2P7-201ENST00000446518 666 ntBASIC4.03□□□□□ -1.76
LDLRP01130 PNPLA4P1-201ENST00000458328 305 ntBASIC4.03□□□□□ -1.76
LDLRP01130 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
LDLRP01130 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRP01130 RN7SL812P-201ENST00000493791 279 ntBASIC4.03□□□□□ -1.76
LDLRP01130 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRP01130 AC034244.1-201ENST00000507687 207 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.03□□□□□ -1.76
LDLRP01130 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.03□□□□□ -1.76
LDLRP01130 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms