Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 AC096992.1-201ENST00000459808 709 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC107398.1-201ENST00000486904 505 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 SUMO1P1-201ENST00000497904 306 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC090071.1-201ENST00000507713 644 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 PTGES3P3-201ENST00000511479 482 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOX2O60902 PAICSP4-201ENST00000517543 1253 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC090136.1-201ENST00000520009 240 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOX2O60902 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.27□□□□□ -1.89
SHOX2O60902 AC106782.4-201ENST00000568264 210 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOX2O60902 AC005000.2-201ENST00000605468 310 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC018754.1-201ENST00000607486 925 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 AP001002.2-201ENST00000625137 386 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AC012442.3-202ENST00000636742 206 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.27□□□□□ -1.89
SHOX2O60902 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
SHOX2O60902 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOX2O60902 SNORA31-201ENST00000362607 130 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 U8.9-201ENST00000365667 134 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 MIR218-2-201ENST00000385006 110 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 RPL5P18-201ENST00000406671 891 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOX2O60902 RN7SKP111-201ENST00000410349 271 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 GOT2P5-201ENST00000433995 546 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.26□□□□□ -1.89
SHOX2O60902 NOTCH2P1-201ENST00000443481 624 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.26□□□□□ -1.89
SHOX2O60902 HMGB1P5-202ENST00000451497 985 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 U3.44-201ENST00000458938 192 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 AC089999.1-201ENST00000460336 374 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 RPL37P6-202ENST00000464216 403 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOX2O60902 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOX2O60902 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.26□□□□□ -1.89
SHOX2O60902 RPL7L1P13-201ENST00000511702 739 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHOX2O60902 NPM1P41-201ENST00000512920 831 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOX2O60902 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.26□□□□□ -1.89
SHOX2O60902 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOX2O60902 AL121594.4-201ENST00000556211 1196 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.26□□□□□ -1.89
SHOX2O60902 AL157394.1-201ENST00000562983 1224 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 MIR5195-201ENST00000583555 115 ntBASIC3.26□□□□□ -1.89
SHOX2O60902 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.26□□□□□ -1.89
SHOX2O60902 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOX2O60902 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOX2O60902 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SHOX2O60902 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.25□□□□□ -1.89
SHOX2O60902 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHOX2O60902 AC118273.1-201ENST00000525324 3006 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 HMGB1P10-201ENST00000395823 563 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 TCEA1P4-201ENST00000415066 844 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AL512504.1-201ENST00000415494 778 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOX2O60902 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHOX2O60902 ATP5C1P1-201ENST00000441945 895 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 ARL5AP2-201ENST00000444698 533 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC104978.1-201ENST00000449387 391 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC104687.1-201ENST00000485829 412 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHOX2O60902 HMGB1P3-201ENST00000502802 616 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHOX2O60902 AC005351.1-201ENST00000511152 786 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 RN7SKP141-201ENST00000516167 338 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 RNU4-60P-201ENST00000517239 135 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 SOD1P3-201ENST00000518682 454 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.25□□□□□ -1.89
SHOX2O60902 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHOX2O60902 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.25□□□□□ -1.89
SHOX2O60902 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOX2O60902 AC074029.1-201ENST00000552531 1044 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 POLR2KP1-201ENST00000553226 168 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.25□□□□□ -1.89
SHOX2O60902 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.25□□□□□ -1.89
SHOX2O60902 MTCO3P13-201ENST00000577757 781 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC015917.1-201ENST00000579654 510 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOX2O60902 AC022387.2-201ENST00000604050 448 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.25□□□□□ -1.89
SHOX2O60902 AL356321.1-201ENST00000621360 228 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHOX2O60902 AC048347.1-201ENST00000624621 427 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.25□□□□□ -1.89
SHOX2O60902 MTND5P3-201ENST00000438536 1800 ntBASIC3.25□□□□□ -1.89
SHOX2O60902 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHOX2O60902 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHOX2O60902 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHOX2O60902 AC090337.1-201ENST00000579651 2074 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms